Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29]
36,198 sequences; 471,780,370 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq1110 98.7 8e-16
seq4 82.4 6e-11
>seq1110
Length=63143
Score = 98.7 bits (108), Expect = 8e-16
Identities = 78/91 (86%), Gaps = 2/91 (2%)
Strand=Plus/Minus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| |||||||||||||||| | |||||| ||||||
Sbjct 40857 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTATGGAACC 40798
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619
| |||||||||| |||||| || | ||| ||
Sbjct 40797 ATAACTGATATAATGAGCCTTTTGCGGTTTC 40767
Score = 98.7 bits (108), Expect = 8e-16
Identities = 78/91 (86%), Gaps = 2/91 (2%)
Strand=Plus/Minus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| |||||||||||||||| | |||||| ||||||
Sbjct 40857 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTATGGAACC 40798
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422
| |||||||||| |||||| || | ||| ||
Sbjct 40797 ATAACTGATATAATGAGCCTTTTGCGGTTTC 40767
>seq4
Length=3596895
Score = 82.4 bits (90), Expect = 6e-11
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 33937 TCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAAT 33996
|||||||| |||||||| || | ||| || |||| ||||||||||| ||||| ||
Sbjct 3259815 TCCTTCTGGATGTTGTAGTCGGACAAGGTACGTCCGTCCTCCAATTGCTTACCGGCGAAG 3259756
Query 33997 ATCAGGCGCTGCTGATCCACCGGCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAA 34056
||||| || || ||||| || | | ||| |||||| | | |||| |||| | |
Sbjct 3259755 ATCAGACGTTGTTGATCTGGAGGAATACCCTCCTTGTCC-TGAATTTTGGCTTTAACGTT 3259697
Query 34057 CTC-ACACTATCAGTAGATTCGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCAC 34115
|| | |||| | || ||| || | || |||||||| || || | |||||| ||
Sbjct 3259696 TTCAATTGTATCGGAAGGTTCAACCTCCAGAGTAATTGTTTTACCCGTCAATGTTTTAAC 3259637
Query 34116 AAAGATTTGCAT 34127
|||||||||||
Sbjct 3259636 GAAGATTTGCAT 3259625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396887230710796
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |