Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq38 87.8 4e-12 >seq38 Length=1220326 Score = 87.8 bits (96), Expect = 4e-12 Identities = 218/324 (67%), Gaps = 18/324 (6%) Strand=Plus/Minus Query 68496 GCAAAGTTGTACGCTTATTGGATCTGTAAA-AATTACCGTGAGTCGTATAACATGTATGT 68554 || ||| |||||| | |||||| ||| | || ||||| || | ||||| |||| || Sbjct 172774 GCTAAGATGTACGGCTTTTGGAT-TGTGATTAACTACCGCGAAGCATATAATATGTTTGC 172716 Query 68555 ATGCAACTCGATTTGTTTCAATCACGAGAGTCCCAACA--GAGGCCATCAGTTCGTGACT 68612 || || || | ||||||||||| |||| || | || | | |||||||| Sbjct 172715 CTGTAATGGCATATTGTTCAATCACGAA--TCCCCACGTCGTGGTGAAAATTTCGTGACA 172658 Query 68613 CGTAAAATCACGAAGGTGGTCGCGAATAT-TTTCAATGGTGTCGAAAAATGCA-TGTATC 68670 || ||||| ||| ||| ||||| || ||||| || | || || | | | || Sbjct 172657 CGCAAAATAACGCGTTCGGTAGCGAAAATATTTCA------TCAACAATTGGAATCTTTC 172604 Query 68671 ----TCGGTAATATAGATGCCAAAAGAGATTGGGGATATGCGAAGGATTACGTAGAAGCA 68726 | |||||| | || | ||| | |||||||| | || | ||||||||| || || Sbjct 172603 GAATTGGGTAATCTCGACTCGAAACGTGATTGGGGTCACGCAATGGATTACGTGGAGGCT 172544 Query 68727 ATGTGGTTGATGCTGCAACAAGATACTCCGGATGACTATGTGATTGCAACAGGGAAAACA 68786 |||||| ||||| ||||| || | || | ||| | ||| ||||| || ||| |||| Sbjct 172543 ATGTGGATGATGTTGCAATTGGAAAAACCTGCTGATTTTGTAATTGCTACCGGGGAAACG 172484 Query 68787 ACGAGCGTTCGTGAGTTCGTGAAA 68810 ||||||||||| || ||| || Sbjct 172483 CACAGCGTTCGTGAATTTGTGGAA 172460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102368498731300