Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29]
36,198 sequences; 471,780,370 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq2 95.1 1e-14
>seq2
Length=4266371
Score = 95.1 bits (104), Expect = 1e-14
Identities = 242/363 (67%), Gaps = 8/363 (2%)
Strand=Plus/Plus
Query 175746 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 175805
|||||||||||||||| || | |||||||| | ||||||||| | |||| |||||
Sbjct 1616664 AACCTGTGCCAATACCATCAGCACCGTTCACCAAAACCATTGGTATGATTGGTATATACC 1616723
Query 175806 AGTCTGGTTCAATCGCACGCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTCG 175865
| | |||||||||| | |||||||| | || | | || || || || |
Sbjct 1616724 ATTGTGGTTCAATCTTTTGACCATCATCAACTTCGTACGTTAACAATGGATCGTCGGCTG 1616783
Query 175866 GATCAAAGATTTTACGAGCATCCTTGGTGAGTTTT--GTGAAGATGTACCT--CGTTTGA 175921
| | || || || | || || || || ||||| || || | || |||
Sbjct 1616784 GGTGGAATATGAGTCGCG--TCAAGGGCGACATTAAGGTGAAAATATAACGAGCGCTTGC 1616841
Query 175922 GACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTG 175981
|| |||||| || ||| ||||| || || |||||||| | ||| || | | |||
Sbjct 1616842 -ACA-ATCTTTACCTCCCTGCAGACGTGTACCGAATTGACCGCGTGGTTCTAATAAATTT 1616899
Query 175982 ATATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCGAGGGAGACT 176041
||||| ||||| |||| || | | |||||| ||||| || || || || || |
Sbjct 1616900 ATATTATTTGATCCCACGTAATTTTGCGCCAAATTGACTATGGTTGCCTGCAGTGACATC 1616959
Query 176042 TCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATC 176101
|| |||||||||||||| ||| | || ||||| | | | ||| || || || |||| |
Sbjct 1616960 TCGCCGTGATGGTAGGCGGACATTTCAGCCACCGAACCAGACAATTGTGCAACTTTCACC 1617019
Query 176102 TCA 176104
|||
Sbjct 1617020 TCA 1617022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613229603329680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |