Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq11 111 2e-19 >seq11 Length=2963766 Score = 111 bits (122), Expect = 2e-19 Identities = 288/432 (67%), Gaps = 8/432 (2%) Strand=Plus/Minus Query 109402 TTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATT 109461 |||| ||| | |||||||| || ||||||||||| |||||||| |||| | || || Sbjct 1983184 TTCGTGCGCAAGTAATACATGCCAGTTTTGAGACCTGCCTTCCAACCGTAAAAGTGTATA 1983125 Query 109462 GAAGAGAGTTTGGAA-AGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATC 109520 |||| |||||| | ||| | | | ||| | ||| | ||||||| ||||| Sbjct 1983124 GAAGTAAGTTTGCCATAGTTTGGTTCAG-CCACGTGTATGTTGAACGACTGACTTTGATC 1983066 Query 109521 GATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCT--AATTTCCCAG 109578 |||||| |||||||| || ||||| | ||| | |||| | ||| ||||| Sbjct 1983065 GATGAAAGCGCCACGATCTGCAGCCATTTTGAT--TGAGGTTTTCACAGAAATCTCCCAA 1983008 Query 109579 ACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCA 109638 ||||| ||||| |||| |||| | || ||| | |||||||| || ||||| Sbjct 1983007 ACAGTTTTGTATAAATCGCGTATATGCTGTGGTATGGATTCAATGTTTTGTATCGAGCCG 1982948 Query 109639 CCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCG 109698 | | | | || || ||||| || | ||| | ||| | || | |||||| Sbjct 1982947 CGACTAGTTATAATATTATTTTTCATATCATCATCCCACAAACCCAACTCAGTTAGATCG 1982888 Query 109699 TC-AACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGAT 109757 |||||| || | || || || ||||||||| | ||| || || ||||| Sbjct 1982887 CGTAACAAG-TGATGATTTACAACTTGAAATTCACCCGAAAGCACACGGCGTGTATAGAT 1982829 Query 109758 GTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGT 109817 || | ||||| ||||| || ||||||||||||| | |||||||| || ||||| || Sbjct 1982828 ATTGGAAGTGTATGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGAAGCAGT 1982769 Query 109818 GGGCATGGGAGC 109829 |||||||| || Sbjct 1982768 TGGCATGGGCGC 1982757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588709503084400