Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1087 114 2e-20 >seq1087 Length=66653 Score = 114 bits (126), Expect = 2e-20 Identities = 271/398 (68%), Gaps = 10/398 (3%) Strand=Plus/Minus Query 159388 AATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCA 159447 ||||| || || || || || || ||||| || |||||||| || ||| ||||| Sbjct 60556 AATGTTTGCTTAATTCCCATCTCGGCGCATGGCACCAATCCTGCGTCTGCACAAATGGCT 60497 Query 159448 GGGATGAAAGTTGTAGGTGTCAAGTGTGATGAT-GATGGCAACATAGACATCAAAGATCT 159506 || |||||||| | | | | | || | | || |||| ||| ||||| | || | Sbjct 60496 GGCATGAAAGTCGAACCTAT-ACGTATTCTCTCCGACGGCAGCATTGACATGGCACATTT 60438 Query 159507 AGAGAAGAAAGCAATCATGAATACATT--TGAACTGTCATGTATTATGATTACATATCCA 159564 | | |||||| || || ||| | ||| |||||||| | ||||| || |||||| Sbjct 60437 ACGCGACAAAGCAG-CA-GAGCACAATAGTGATTTGTCATGTCTGATGATCACCTATCCA 60380 Query 159565 TCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGAT-TGTTCATGAGA- 159622 || ||| ||||||||||| | || | | ||||| | ||| || || | | Sbjct 60379 TCCACAATGGGTGTATTTGAGG-AGACTGTTG-CTGATATATGTGATCTGATCCATACAC 60322 Query 159623 ATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAAC 159682 |||| || ||||||||| | || || || ||| | ||||||||||| |||||| | Sbjct 60321 ATGGCGGACAGGTATATTTGGACGGCGCTAATATGAATGCACAGGTTGGTCTATGTCGCC 60262 Query 159683 CATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCAC 159742 | | || ||||| ||||| | ||| | || ||||||| || || || || |||| Sbjct 60261 CCGGCGATTATGGCAGTGATGTCTCTCACTTGAATCTACATAAAACTTTTTGCATACCAC 60202 Query 159743 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTA 159780 | || ||||| |||||||| | |||||||| |||||| Sbjct 60201 ACGGTGGTGGTGGTCCTGGTATGGGTCCTATCGGTGTA 60164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587785121533280