Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29]
36,198 sequences; 471,780,370 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq1087 114 2e-20
>seq1087
Length=66653
Score = 114 bits (126), Expect = 2e-20
Identities = 271/398 (68%), Gaps = 10/398 (3%)
Strand=Plus/Minus
Query 159388 AATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCA 159447
||||| || || || || || || ||||| || |||||||| || ||| |||||
Sbjct 60556 AATGTTTGCTTAATTCCCATCTCGGCGCATGGCACCAATCCTGCGTCTGCACAAATGGCT 60497
Query 159448 GGGATGAAAGTTGTAGGTGTCAAGTGTGATGAT-GATGGCAACATAGACATCAAAGATCT 159506
|| |||||||| | | | | | || | | || |||| ||| ||||| | || |
Sbjct 60496 GGCATGAAAGTCGAACCTAT-ACGTATTCTCTCCGACGGCAGCATTGACATGGCACATTT 60438
Query 159507 AGAGAAGAAAGCAATCATGAATACATT--TGAACTGTCATGTATTATGATTACATATCCA 159564
| | |||||| || || ||| | ||| |||||||| | ||||| || ||||||
Sbjct 60437 ACGCGACAAAGCAG-CA-GAGCACAATAGTGATTTGTCATGTCTGATGATCACCTATCCA 60380
Query 159565 TCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGAT-TGTTCATGAGA- 159622
|| ||| ||||||||||| | || | | ||||| | ||| || || | |
Sbjct 60379 TCCACAATGGGTGTATTTGAGG-AGACTGTTG-CTGATATATGTGATCTGATCCATACAC 60322
Query 159623 ATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAAC 159682
|||| || ||||||||| | || || || ||| | ||||||||||| |||||| |
Sbjct 60321 ATGGCGGACAGGTATATTTGGACGGCGCTAATATGAATGCACAGGTTGGTCTATGTCGCC 60262
Query 159683 CATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCAC 159742
| | || ||||| ||||| | ||| | || ||||||| || || || || ||||
Sbjct 60261 CCGGCGATTATGGCAGTGATGTCTCTCACTTGAATCTACATAAAACTTTTTGCATACCAC 60202
Query 159743 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTA 159780
| || ||||| |||||||| | |||||||| ||||||
Sbjct 60201 ACGGTGGTGGTGGTCCTGGTATGGGTCCTATCGGTGTA 60164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587785121533280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |