Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1 286 4e-72 >seq1 Length=5074932 Score = 286 bits (316), Expect = 4e-72 Identities = 482/690 (70%), Gaps = 6/690 (1%) Strand=Plus/Plus Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069 ||| || |||||||| || || | | ||||||||| | | || ||||| |||| || || Sbjct 4719476 ATCAGCCACAAATTCGATATAATCAGACATTAGTTTACAATTCATACCGATTAAATTAAC 4719535 Query 37070 TGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAA 37128 || | || || | ||||| | || || ||| | ||||| ||| || ||| | || Sbjct 4719536 CGGCAAAGCGTCAGTTAAGAATTC-TTGCTCAATTGTAACAGCTTCTGAAATTATTTCAA 4719594 Query 37129 CAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCAC 37188 |||| ||| | | |||| | | | |||| || |||| ||||||||| || |||| Sbjct 4719595 CAATTCGTTCATTACTTGGTTTTTGTATCAAATGTTGGAACATTAAACATGCGAAGTCAC 4719654 Query 37189 AATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAAC 37248 |||||| ||| ||||||| || | |||||||||||| || || || |||||||||| Sbjct 4719655 AATGTAGACCCTCATCTCGTGAGATTAGTTCATTAGAAAATGTCAAGCCAGGCATTAAAC 4719714 Query 37249 CTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTG 37308 | | ||| |||| |||||| || | |||||| ||| |||||||| |||||||| | Sbjct 4719715 CGCGTTTCTTAAGCCAAAAGATCGAAGCAAAACTGCCACTGAAGAAAATGCCTTCAACAG 4719774 Query 37309 CTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA-TAATCAGAAATCCAttttttt 37367 | |||||||| | | |||| ||| ||||||| | | | | ||||||||| | Sbjct 4719775 CGGCAAATGCAATTACACGTTCACC-AAAGTTGGCCGACTTAGAAGAAATCCAAGCAAGT 4719833 Query 37368 GTCCAATCTGCCTT-TAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtt 37426 | |||||| ||||| |||| | || | ||||| ||||| || || || | | || Sbjct 4719834 GCCCAATCAGCCTTACGCTTTACCGCAGGC-ATTGTCTCAATAGCGTTGAATAAGTAATT 4719892 Query 37427 tttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAAT 37486 | ||| || ||| | ||||| |||||||||| || ||||||||||||||| || | Sbjct 4719893 TCTTTGTTTCGAATCCTTAATATACGTATCAATTAATATACTATACATTTCAGAATGCAC 4719952 Query 37487 ATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTT 37546 |||||| ||||| || ||||| ||||| || || | || || | | ||| || || | Sbjct 4719953 ATTTTCCATAGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTAACTTGCACTTCTTG 4720012 Query 37547 AAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAG 37606 || | | | |||| |||||||| || || |||||| || || ||||| || | Sbjct 4720013 GCTGAAGCGTTCAACTAAATTTTCATTCACAATACCATCAGATGCGGCGAAGAAGGCTAA 4720072 Query 37607 AACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTT 37666 || | | || ||||||| ||||| || | | | |||||||| |||||||| Sbjct 4720073 CACGTGTGAAATGAAATGTCGTTCATTATCAGTGAGACGTGCCCAATCATCCATATCTTT 4720132 Query 37667 TGATAAATCAACTTCATCAACGGTCCAAAA 37696 || | ||| ||||| ||||| ||||| || Sbjct 4720133 AGAAAGATCTACTTCCTCAACTGTCCAGAA 4720162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592048791455920