Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1087 107 2e-18 >seq1087 Length=66653 Score = 107 bits (118), Expect = 2e-18 Identities = 257/377 (68%), Gaps = 10/377 (3%) Strand=Plus/Plus Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241 |||||| |||||||| | |||||||| ||||| || ||||| || || || || ||||| Sbjct 60164 TACACCGATAGGACCCATACCAGGACCACCACCACCGTGTGGTATGCAAAAAGTTTTATG 60223 Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301 || ||| | ||| | ||||| ||||| || | || |||||| |||||||| Sbjct 60224 TAGATTCAAGTGAGAGACATCACTGCCATAATCGCCGGGGCGACATAGACCAACCTGTGC 60283 Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCAT-TGTCATGAAC-GATCTTACAT 138359 ||| | ||| || || || | ||||||||| || |||| ||| || | |||| | || Sbjct 60284 ATTCATATTAGCGCCGTCCAAATATACCTGTCCGCCATGTGTATGGATCAGATCACATAT 60343 Query 138360 ATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACAT 138419 ||| | | || | ||||||||||| || |||||||| || ||||| | |||| Sbjct 60344 ATCAG-CAACAGTCT-CCTCAAATACACCCATTGTGGATGGATAGGTGATCATCAGACAT 60401 Query 138420 GAGAGTTCA--AATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGC 138477 || | ||| | ||| || || |||||| | || || | ||||| ||| ||| Sbjct 60402 GACAAATCACTATTGTGCTC-TG-CTGCTTTGTCGCGTAAATGTGCCATGTCAATGCTGC 60459 Query 138478 CATC-ATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGA 138536 | || | | || | | | | | |||||||| || ||||| |||| |||||| Sbjct 60460 CGTCGGAGAGAATACGT-ATAGGTTCGACTTTCATGCCAGCCATTTGTGCAGACGCAGGA 60518 Query 138537 TTAGTTCCATGTGCTGA 138553 || || ||||| || || Sbjct 60519 TTGGTGCCATGCGCCGA 60535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578736417698960