Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq11 111 2e-19 >seq11 Length=2963766 Score = 111 bits (122), Expect = 2e-19 Identities = 690/1096 (63%), Gaps = 20/1096 (2%) Strand=Plus/Plus Query 75502 GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 75561 ||| |||||||| || ||||| | | |||||||| || || || || ||| Sbjct 1981748 GGGCACAAATGGCACCTCGAATGGTTTGGTGCCAATGCTGCGAGTGTTCAATAATGTAGC 1981807 Query 75562 GCGCTATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAAC 75617 || ||||| |||||| || || || ||| | || | || ||||| |||||| Sbjct 1981808 ACGTTATGTGGATCAAGGTGGCGGTAAACGGCCAGGCG-CCTTTGCCATCTACCTGGAAC 1981866 Query 75618 CATGGCATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGAAGAG 75676 |||||||||| ||||| | || || | || || | || ||| ||| | |||||| Sbjct 1981867 CATGGCATGCTGATATATTCGAATTTTTGGATTTGAAGAAA-AACACCGGTAAAGAAGAG 1981925 Query 75677 GCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736 || |||||| | || | | |||||||| || || || || |||| || || Sbjct 1981926 CACCGCGCCAGAGATTTGTTCTACGCTCTGTGGATACCTGATCTATTTATGAGACGTGTC 1981985 Query 75737 GAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCG 75796 || | || | ||||| || | || ||| |||| || ||| | || | | Sbjct 1981986 GAAGCCAATGAAGACTGGTCGCTAATGTGCCCACACAAATGTCCTGGTTTACATGAAGTG 1982045 Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG 75856 |||||||||||||||| | || || |||||| |||| || | || ||| | Sbjct 1982046 TGGGGTGAGGAGTTTGAAAAATTGTATCTGAAATATGAACAGGAAGGACGTGCTAATAAG 1982105 Query 75857 ACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 | ||| ||| | ||||| || ||| | |||| || |||||||| ||| Sbjct 1982106 AAGGTAAAAGCACAAAGTCTTTGGTTTGCCATTATTGAATCGCAAGTAGAGACTGGCACA 1982165 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 || || ||| | || || ||||||||||| |||||||| || ||||| | || ||| Sbjct 1982166 CCGTACATGTTATATAAAGATGCTTGTAATCGAAAGAGTAATCAGCAGAATGTTGGCACA 1982225 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 || ||| | ||| | || || |||||| | || || | | |||||| ||| Sbjct 1982226 ATTAAGTGTAGTAATTTATGTACCGAAATTGTGGAATATTCGGCACCCGATGAGGTAGCT 1982285 Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTT 76096 || || || || || || ||||| | | || ||||| |||| || | | Sbjct 1982286 GTGTGTAACTTAGCTTCGATCGCATTGAACATGTTTGTCACACCCGAGA---AAACGTAT 1982342 Query 76097 GATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATT 76156 || | | | || | || |||| |||| ||||| ||| | || | |||| Sbjct 1982343 GACTTTAAGCGCCTCAAAGAGGTCACCAAGACCGTTACACGTAATTTGAATAAAATCATA 1982402 Query 76157 GACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATT 76216 |||| ||| |||||| | | || || || ||| | |||| | || || Sbjct 1982403 GACATTAATCATTATCCAATACCGGAGGCAAAGAAATCGAATTTCAGACATCGTCCCATC 1982462 Query 76217 GGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCA 76276 ||| | || || |||||| | || || | || ||||| || || ||| || Sbjct 1982463 GGTATTGGCGTACAAGGTTTTGCCGACGCTTTAATTTTAATGCGTTATCCATACGAAAGT 1982522 Query 76277 GATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAG 76336 |||||||| | ||| | || || ||||| || || | | | ||||| Sbjct 1982523 GATGAAGCATTCCGCTTAAATCAACAAATATTCGAAACTATTTACTATGGTGCGCTGGAA 1982582 Query 76337 GCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCG 76396 | ||||| ||||| || ||| | || | ||||| |||| || ||||| |||| Sbjct 1982583 TCCAGTTGCGAATTAGCCGAAAAATATGGCACTTATGAAACATATGTAGGTTCACCCG-T 1982641 Query 76397 TCCCAAGGG-GTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACG--AC 76453 | ||||| | || |||| ||| ||||||| | || |||||| | | || | | Sbjct 1982642 TAGTAAGGGTATTCTACAGTATGACATGTGGG-ATAAGACACCAAG-TGATCTTTGGAAT 1982699 Query 76454 TGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGG 76511 ||| | | ||||| || ||| | | || |||||||| ||||| || | | Sbjct 1982700 TGGACCGAATTGAAGGAGAAAATTAAGCAACATGGCGTTCGTAAC--TCTTTGCTGCTTG 1982757 Query 76512 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCAT 76571 | || |||||||| || || || |||||||| |||| || ||||| | |||||||||| Sbjct 1982758 CGCCCATGCCAACTGCTTCAACAGCACAAATTATGGGCAACAATGAGTCATTTGAACCAT 1982817 Query 76572 ACACAACAAACATCTA 76587 |||| | || ||||| Sbjct 1982818 ACACTTCCAATATCTA 1982833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596299667170240