Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq385 95.1 2e-14 >seq385 Length=177728 Score = 95.1 bits (104), Expect = 2e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 183010 ACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCAT 183069 || || ||| ||||||||||||| ||||||||||| || || | ||||| ||||||||| Sbjct 118989 ACCCACGACGATCTATGGAATGCAGCACAAATACAGTTGTTGCGTGAAGGCAAAATGCAT 118930 Query 183070 AGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGG 183111 ||||| | || ||||| ||||| || ||||| || || ||| Sbjct 118929 GGTTTTCTTCGTATGTATTGGGCAAAGAAGATCCTGGAGTGG 118888 Score = 84.2 bits (92), Expect = 4e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 182998 GAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAA 183057 ||||||||| | ||| | || || ||||||||| | ||||||||| || || | ||| Sbjct 114465 GAAAAGGCAAATACATACGATGACCTCTGGAATGCAGCCCAAATACAGTTGTTGCGTGAA 114406 Query 183058 GGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGG 183111 || |||||||| ||| | || | ||| ||||| ||||||||||| |||||| Sbjct 114405 GGCAAAATGCACGCATTTCTTCGTAAGTATTGGGCAAAAAAGATACTGGAATGG 114352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903002429017280