Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq160 96.9 8e-15 >seq160 Length=384457 Score = 96.9 bits (106), Expect = 8e-15 Identities = 124/170 (73%), Gaps = 6/170 (4%) Strand=Plus/Plus Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377 || || |||| ||| | || ||| | || ||| | ||||| |||||||| ||||||| | Sbjct 53565 GATAACGATTTGGTGATATTTAATCGTCAGCCAACGCTGCACAAAATGTCGATGATGGGT 53624 Query 305378 CATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTAC---G 305434 ||| |||||||| | || | | ||||| || | || | | ||||||| | Sbjct 53625 CATCGTGTCAAAGTGCTGCCTTGGTCCACATTCCGGATGAACCT---TTCTTGTACCTCG 53681 Query 305435 CCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCA 305484 || || ||||| ||||| ||||| |||||||||||| | ||||||||||| Sbjct 53682 CCATACAATGCAGATTTCGATGGTGATGAAATGAATTTACATGTACCTCA 53731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186262371800278