Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq38 91.5 2e-13 >seq38 Length=1220326 Score = 91.5 bits (100), Expect = 2e-13 Identities = 194/286 (68%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 161408 GCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCC 161467 ||||| | || || | ||||||||| | |||||| | || ||| ||| ||| Sbjct 172774 GCTAAGATGTACGGCTTTTGGATTGTGATTAACTACCGCGAAGCATATAATATGTTTGCC 172715 Query 161468 AGTAGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGT 161527 ||| ||| || | ||||| || || || ||||| || ||||| | |||||| || || Sbjct 172714 TGTAATGGCATATTGTTCAATCACGAATCCCCACGTCGTGGTGAAAATTTCGTGACACGC 172655 Query 161528 AAGATTACTAGGGGACTATCCCGTAT-TAGTACAGGA-CTACAGGATTGTCTATACCTAG 161585 || || || | | | | || | || | || | | | ||| | | | | | | Sbjct 172654 AAAATAAC--GCGTTCGGTAGCGAAAATATTTCATCAACAATTGGAATCTTTCGAATTGG 172597 Query 161586 GTAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGT 161645 ||||||| |||| | ||| ||||||||||| || || || ||||||||||||||| Sbjct 172596 GTAATCTCGACTCGAAACGTGATTGGGGTCACGCAATGGATTACGTGGAGGCTATGTGGA 172537 Query 161646 TGATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGG 161691 ||||||| ||| ||||| |||| ||| | ||| ||||| || || Sbjct 172536 TGATGTTGCAATTGGAAAAACCTGCTGATTTTGTAATTGCTACCGG 172491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729599325104240