Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq28 91.5 2e-13 >seq28 Length=1372515 Score = 91.5 bits (100), Expect = 2e-13 Identities = 190/276 (69%), Gaps = 8/276 (3%) Strand=Plus/Plus Query 31132 CGAGTTAATTGCTCTCGGAGACCTTCGATGTGATTGACATAAATATGCGCATCGCCAATA 31191 || ||||| || ||| || |||| || ||||| ||| | ||| ||||| || | | Sbjct 389866 CGTGTTAACTGTTCTGTTAGCGCTTCAATATGATTATTATAGACATGTGCATCACCCAAA 389925 Query 31192 GAGTGTACCAATTCCCCTGGTCTTAGATGGGTCAATTTG-GCAATCACAT--GAACCAAA 31248 | ||| || || |||||||| | |||| || ||| || ||||||| | | | || Sbjct 389926 GTGTGGACGAAATCCCCTGGCCGGAGATCAGT-AATATGAGCAATCATGTAGGTAAGTAA 389984 Query 31249 AGCGCATAACTCGCTATGTTGAATGGTACACCCAATCCCAAATCGGCAGATCGTTGATAT 31308 |||| | | || || || ||||||||||||||||||| || ||| ||||| ||| Sbjct 389985 AGCGTACGAG--GCAATATTAAATGGTACACCCAATCCCATGTCAGCACTGCGTTGGTAT 390042 Query 31309 AACAAACAGGAAAGTTCATCTCCGGTCACGTAAAATTGAAATAACACA-TGACAAGGCGG 31367 || ||| || | || | || || ||||||| ||| || |||||||| || Sbjct 390043 AATTGACAAGATAACTCTCCATTGGCAACAAAAAATTGTG-TAAGGCAATGACAAGGTGG 390101 Query 31368 CAAAGCCATTTCACAGGTATCGACGGGATTCCAAGC 31403 | |||||||| | ||||||| ||||||||||| Sbjct 390102 TAGAGCCATTTGAGGAATATCGACTGGATTCCAAGC 390137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512785472361440