Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq11 96.9 1e-14 >seq11 Length=2963766 Score = 96.9 bits (106), Expect = 1e-14 Identities = 207/308 (67%), Gaps = 6/308 (2%) Strand=Plus/Plus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 |||||| | || |||||||| || || || || || || |||||||| ||||| ||||| Sbjct 1981779 CCAATGCTGCGAGTGTTCAATAATGTAGCACGTTATGTGGATCAAGGTGGCGGTAAACGG 1981838 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACA---TTGAACGGTTTTTA 255097 ||||| || || ||||||||||||| || ||||| || || | | ||| ||||| Sbjct 1981839 CCAGGCGCCTTTGCCATCTACCTGGAACCATGGCATGCTGATATATTCGAA---TTTTTG 1981895 Query 255098 CTGCTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTC 255157 || | || ||||| | || |||| |||| | || | | | |||| | Sbjct 1981896 GATTTGAAGAAAAACACCGGTAAAGAAGAGCACCGCGCCAGAGATTTGTTCTACGCTCTG 1981955 Query 255158 TGGTGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGT 255217 ||| ||||| |||||| |||| || ||| | || |||| || ||||| Sbjct 1981956 TGGATACCTGATCTATTTATGAGACGTGTCGAAGCCAATGAAGACTGGTCGCTAATGTGC 1982015 Query 255218 CCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCTG 255277 || || || || ||| || || |||||||| |||||||||||| |||||||| Sbjct 1982016 CCACACAAATGTCCTGGTTTACATGAAGTGTGGGGTGAGGAGTTTGAAAAATTGTATCTG 1982075 Query 255278 GAGTACGA 255285 | || || Sbjct 1982076 AAATATGA 1982083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587599350610110