Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 8e-12 >seq2 Length=4266371 Score = 86.0 bits (94), Expect = 8e-12 Identities = 163/240 (68%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 179064 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATT 179123 |||||| || ||| ||||| || || |||||||| | ||| || | | ||| ||||| Sbjct 1616845 ATCTTTACCTCCCTGCAGACGTGTACCGAATTGACCGCGTGGTTCTAATAAATTTATATT 1616904 Query 179124 GTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCACC 179183 ||||| |||| ||| | | ||||| ||||| || || || || || | || || Sbjct 1616905 ATTTGATCCCACGTAATTTTGCGCCAAATTGACTATGGTTGCCTGCAGTGACATCTCGCC 1616964 Query 179184 GTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCATCTCATC 179243 ||||||||| || ||| | || ||||| | | | ||| || || || |||| |||| Sbjct 1616965 GTGATGGTAGGCGGACATTTCAGCCACCGAACCAGACAATTGTGCAACTTTCACCTCACG 1617024 Query 179244 CTTGAGGTTCTTGTGGAAGCACGCATACATCACCTTTCTTTGTGAAGGCTTGAGGCCGTC 179303 ||| ||| | ||| || | | |||| || || | ||| |||||| | ||||| Sbjct 1617025 TTTGTCGTTACGTTTGAAACAGGTAAACATTACTTTGCGTTGACCAGGCTTAAATCCGTC 1617084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618155373532880