Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq28 102 7e-17 >seq28 Length=1372515 Score = 102 bits (112), Expect = 7e-17 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 118474 TCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTA 118533 ||||| ||||| |||||||||| ||||| || | || || | ||| || || || Sbjct 389890 TCAATATGATTATTATAGACATGTGCATCACCCAAAGTGTGGACGAAATCCCCTGGCCGG 389949 Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || | || | |||||||||||||| || | ||| ||| ||| | |||||| || Sbjct 389950 AGATCAGTAATATGAGCAATCATGTAGGTAAGTAAAGCGTACGAGGCAATATTAAATGGT 390009 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 ||||||| |||||||| || | ||||| ||||| ||||| | ||| || || ||| Sbjct 390010 ACACCCAATCCCATGTCAGCACTGCGTTGGTATAATTGACAAGATAACTCTCCATTGGCA 390069 Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694 ||| |||| || | | | ||||| || || ||| |||| Sbjct 390070 ACAAAAAATTGTGTAAGGCAATGACAAGGTGGTAGAGCCAT 390110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414293948119672