Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 3e-15 >seq4 Length=3596895 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 39067 AAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGT 39126 ||||||| || ||||||| ||| || || || ||||||||||||| ||||| ||| Sbjct 3259614 AAGCGTAGAACTAAATGTAAAGTGGATTCCTTCTGAATATTATAATCGGACAGTGTGCGT 3259555 Query 39127 TCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCT 39186 | || || | ||||||||| || || || | ||| || || || | ||| | | || Sbjct 3259554 CCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCC 3259495 Query 39187 TTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTG 39246 || || ||||| ||||| || | | |||||| | ||| || |||| ||| Sbjct 3259494 TTATCTTGAATTTTAGCTTTGACATTCTCAATAGTATCGGAAGGCTCAACCTCCAAAGTG 3259435 Query 39247 ATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || |||||||||||| ||||| || || || ||||| Sbjct 3259434 ATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCAT 3259397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429356100320774