Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1 316 2e-81 >seq1 Length=5074932 Score = 316 bits (350), Expect = 2e-81 Identities = 488/691 (71%), Gaps = 8/691 (1%) Strand=Plus/Plus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || |||||||| ||||| | | |||| | | | | || ||||| |||| || || Sbjct 4719476 ATCAGCCACAAATTCGATATAATCAGACATTAGTTTACAATTCATACCGATTAAATTAAC 4719535 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 || | || ||| ||||||| || ||||| | |||||| ||| |||||||| ||| Sbjct 4719536 CGGCAAAGCGTCAGTTAAGAATTCTTGCTCAATTGTAACAGCTTCTGAAATTATTTCAAC 4719595 Query 23463 AATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACA 23522 ||| ||| | ||| ||| | | | |||| | |||| ||||||||| || ||||| Sbjct 4719596 AATTCGTTCATTACTTGGTTTTTGTATCAAATGTTGGAACATTAAACATGCGAAGTCACA 4719655 Query 23523 ATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCC 23582 |||||| || ||||| | || | ||||||||||||||| || || |||||||| || Sbjct 4719656 ATGTAGACCCTCATCTCGTGAGATTAGTTCATTAGAAAATGTCAAGCCAGGCATTAAACC 4719715 Query 23583 TCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGC 23642 ||||| |||| |||||| || | |||||| || |||||||| || |||||||| Sbjct 4719716 GCGTTTCTTAAGCCAAAAGATCGAAGCAAAACTGCCACTGAAGAAAATGCCTTCAACAGC 4719775 Query 23643 CGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGT 23702 ||||| || | | |||| |||||| | || | | ||||||||| || Sbjct 4719776 GGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTAGAAGAAATCCAAGCAAGTGC 4719835 Query 23703 CCAATTAGCCTT-CAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTT 23761 ||||| |||||| | ||| | || | ||||| ||||| || || || | || || Sbjct 4719836 CCAATCAGCCTTACGCTTTACCGCAGGC-ATTGTCTCAATAGCGTTGAATAAGTAATTTC 4719894 Query 23762 TTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATAT 23821 ||| || ||| | ||||| |||||||||| || |||||||||||||||||| | || Sbjct 4719895 TTTGTTTCGAATCCTTAATATACGTATCAATTAATATACTATACATTTCAGAATGCACAT 4719954 Query 23822 TTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAA 23881 |||| |||||||| ||||| ||||| || || | || || | | ||| || || | Sbjct 4719955 TTTCCATAGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTAACTTGCACTTCTTGGC 4720014 Query 23882 AAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAA 23941 || | || | |||||||||| || |||||||||||| || || ||||| || | | Sbjct 4720015 TGAAGCGTTCAACTAAATTTTCATTCACAATACCATCAGATGCGGCGAAGAAGGCTAACA 4720074 Query 23942 CATATTTTATAAAATGTCTTTC---ATCAGTTGATAATTTTTTCCAATCATTAATATCTT 23998 | | | || ||||||| ||| ||||| ||| | | |||||||| ||||||| Sbjct 4720075 CGTGTGAAATGAAATGTCGTTCATTATCAG-TGAGA--CGTGCCCAATCATCCATATCTT 4720131 Query 23999 TTGATAAATCAACTTCATCAACTGTCCAAAA 24029 | || | ||| ||||| ||||||||||| || Sbjct 4720132 TAGAAAGATCTACTTCCTCAACTGTCCAGAA 4720162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521252039717200