Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20oleae_20[refseq_20GCF_5F001188975.1_202015-07-29] 36,198 sequences; 471,780,370 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq305 111 2e-19 >seq305 Length=215067 Score = 111 bits (122), Expect = 2e-19 Identities = 226/331 (68%), Gaps = 10/331 (3%) Strand=Plus/Minus Query 155730 CGACTCAACGCCGTCGATTGAGCGGCGCGTACCAACCCTTCCAATTCAGCGCCGCTGTAA 155789 ||| ||| || || ||||| || ||||| ||||| || |||| |||||||| || | Sbjct 135736 CGATTCATAGCGGTAGATTGTGCTGCGCGCACCAAACCCTCCAGCTCAGCGCCACTAAAG 135677 Query 155790 TTTTTAGTTTCAACG--GCTATTTTATTTAAGTCTACGTCGGAAGCTAATATGTTGTGAG 155847 || || ||| || | || |||| || |||| || || |||| | |||| | Sbjct 135676 TTCTTCGTT--AATGTAGCAATTTCCTTCGAGTCAACATCACCGGCTA---TCTTGTTAA 135622 Query 155848 ATTTCATTTTA-GCAACGT--GCACCTTTAAAATTTGAAGACGCCCCTTTTCATCGGGTA 155904 ||| | || || ||| | | |||| |||||| | ||| || | ||| | || | Sbjct 135621 ATTCCCGCATACGCTTCGTATGTATATTTAGAATTTGCACACGACCTTCTTCGTTCGGCA 135562 Query 155905 ATCCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAGT 155964 | | ||| || || | || ||||| || || |||| | || ||||||||||| | || Sbjct 135561 AACTAATCTCCATTTGCACCTCCAAGCGACCGGGTCGCATCAAAGCTTCGTCAATCATGT 135502 Query 155965 CGGGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGATTCTACACCGTCTATTT 156024 | ||||||| ||||| || || | | |||||||| || ||| ||||| || |||| Sbjct 135501 CACGTCTGTTTGTCATGCCGATCACCAGTATGTTGTTCAACTGTTCGACACCATCAATTT 135442 Query 156025 TAGACAATAATTGATTGACTACGGCGTCGTG 156055 ||| | |||||||||||||| | ||||| Sbjct 135441 TAGCAAGCAATTGATTGACTACTGTATCGTG 135411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666773365148880