Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq2312 154 3e-32
seq23396 93.3 9e-14
seq55 93.3 9e-14
seq601 91.5 3e-13
seq60 91.5 3e-13
seq5883 89.7 1e-12
>seq2312
Length=53118
Score = 154 bits (170), Expect = 3e-32
Identities = 307/449 (68%), Gaps = 22/449 (5%)
Strand=Plus/Plus
Query 281573 AATGTTAGTAGACCAACCGGTTCCAATACCACTTGAACCATTTACCAAAATACTCGGGAT 281632
||| || || |||||||| || ||||||||| | |||||| ||||||| | || ||
Sbjct 32125 AATCTTTGTGGACCAACCTGTGCCAATACCATCAGCACCATTCACCAAAACCATTGGTAT 32184
Query 281633 AATAGGTACATAACATTCTGGTTCAATTTTATCACCATCATCATACAAATACTTCAGAAG 281692
||| |||| ||| || | ||||||||| || | |||||||||| ||||| | |
Sbjct 32185 AATTGGTATATACCACTGTGGTTCAATCTTTTGACCATCATCA-------ACTTC-GTAC 32236
Query 281693 GTTATCATCTGTATCGACG---------AAAACCTGTCGCGTCTTAGGGTT-CAGTTTCG 281742
|||| || | | |||| || || | |||||||| ||||| || | |
Sbjct 32237 GTTAACAACGG-ATCGTCGGCTGGGTGGAATATGAGTCGCGTCA-AGGGTGACATTAAGG 32294
Query 281743 TGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAACTGAC 281802
|||| ||||| | || ||||| ||||||||||||||||| | | ||||| ||||
Sbjct 32295 TGAAAATATAACGAGCGCTCGCACAATCTTTACCACCCTGCAGACGTGTACCAAATTGAC 32354
Query 281803 CCTCCGGCAACAACCAGTTAATGTTA-TTGCTCCCGACGTAATCCTGAGCCAGGTTGACG 281861
| ||| ||| | ||||| ||| ||| |||| ||||||| || |||| |||||
Sbjct 32355 CACGAGGCTCCAATAAATTAATATTATTTGATCCC-ACGTAATTTTGCGCCAAATTGACT 32413
Query 281862 ATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCA 281921
|| || |||| || || | ||| ||||| || |||||| ||| || ||| |||||
Sbjct 32414 ATGGTAGCCTGCAGTGACATCTCGCCGTGATGGTAGGCGGACATTTCAGCCACAGAACCA 32473
Query 281922 CTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAATATAATACT 281981
|| || || || ||||| || | | ||| ||||||||| | | | | |||
Sbjct 32474 GACAATTGCGCAACTTTCACCTCACGTTTGTCGTTACGTTTGAAACAGGTAAACATAACT 32533
Query 281982 TTTCGTTGAGAAGGCTTGAAACCATCAAC 282010
|| ||||| ||||| |||||||| ||
Sbjct 32534 TTGCGTTGGCCCGGCTTAAAACCATCTAC 32562
>seq23396
Length=1259
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767
||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct 387 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 446
Query 165768 GCCCCACGATGGGC 165781
|||||||| |||||
Sbjct 447 GCCCCACGTTGGGC 460
>seq55
Length=530491
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767
||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct 216650 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 216591
Query 165768 GCCCCACGATGGGC 165781
|||||||| |||||
Sbjct 216590 GCCCCACGTTGGGC 216577
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 221951 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 221892
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 221891 CCCCACGTTGGGC 221879
>seq601
Length=129108
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 33083 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 33142
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 33143 CCCCACGTTGGGC 33155
>seq60
Length=511764
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 329175 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 329116
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 329115 CCCCACGTTGGGC 329103
>seq5883
Length=22155
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 20298 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 20357
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 20358 CCCACGTTGGGC 20369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057390834294800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |