Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq225 190 2e-43 >seq225 Length=233467 Score = 190 bits (210), Expect = 2e-43 Identities = 453/680 (67%), Gaps = 16/680 (2%) Strand=Plus/Minus Query 16036 ATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT--AAGTCGT 16093 ||| || |||||||| ||||| | |||||| | |||||| || || || || || Sbjct 26879 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAAATTC-- 26822 Query 16094 ACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCG 16153 ||||| | ||| | ||||| |||| || || || ||| ||||| ||| || || Sbjct 26821 ACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCA 26762 Query 16154 GTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCG 16213 ||| | | ||| | || ||| |||| ||||| | ||| |||||||| Sbjct 26761 ACAATTCGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCA 26702 Query 16214 CAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTT 16273 ||||| ||||| || |||| || ||||| |||||||| || || ||||||||| Sbjct 26701 CAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAA 26642 Query 16274 CCTCGTTTCTTTAACCAGAATATCGCAGCAAA--TGACCCCGAAAAGAATATACCCTCAA 16331 || |||||||| | |||||| |||| |||||| || | | ||| ||| ||||| |||| Sbjct 26641 CCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAA--GAAAATACCTTCAA 26584 Query 16332 CAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCT 16391 | | ||||| || |||| ||||| | | | || || |||||| Sbjct 26583 CGGCAGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTCGAGGAAATCCAAGCAA 26524 Query 16392 GTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAA----T 16447 | |||| || || || | |||| | ||| || ||||| || || || || | Sbjct 26523 GCGCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCATTGAATAAGTAAT 26464 Query 16448 TTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAG 16507 | || | |||| | || | ||||| |||||||| | || || |||||||| || Sbjct 26463 TCCTTTGTTTCGAG----TCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAA 26408 Query 16508 TGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACT 16567 || | ||||| || || || ||||||||||||||||| || ||||| | | ||| ||| Sbjct 26407 TGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACT 26348 Query 16568 TCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAAC 16627 ||| | | || ||||| | | || |||||||| ||||| ||| ||| || ||||| Sbjct 26347 TCCTGGCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAG 26288 Query 16628 GCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAA 16687 || || | ||| ||| |||| | ||| | | || ||| |||||| | | | Sbjct 26287 GCTAACACGTGTGAAATAAAATGTCGTTCATTATCAGTTAGACGTGCCCAATCATCCATA 26228 Query 16688 TCTTTGGATATATCCACTTC 16707 ||||| || | ||| ||||| Sbjct 26227 TCTTTAGAAAGATCTACTTC 26208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511210089947200