Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq157 150 1e-31
>seq157
Length=290505
Score = 150 bits (166), Expect = 1e-31
Identities = 412/624 (66%), Gaps = 8/624 (1%)
Strand=Plus/Minus
Query 101645 GGAAACGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAG 101704
|||||| | ||| ||||||| ||||| ||| | || ||||| |||| ||||
Sbjct 145088 GGAAACTCCCGAGGTTTTCGCGTTAACTGTTCTTTTAATGCTTCAATATGATTATTATAG 145029
Query 101705 ATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCA 101764
| || ||||| || | ||| |||| ||| || || || |||| ||| | |||||||
Sbjct 145028 ACATGTGCATCGCCCAAAGTGTGGACAAAATCCCCTGGTCGGAGATCAGTAATATGAGCA 144969
Query 101765 ATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCA 101824
||||| | || | | || || ||||| |||||||| || || || ||||||||
Sbjct 144968 ATCATATAGGTAAGCAAAGCGTACGAGGCAATATTAAATGGTACACCCAATCCCATATCG 144909
Query 101825 GCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAAT 101884
|| | ||| || | |||||| || | | ||||| ||| ||||||| ||
Sbjct 144908 GCACTGCGTTGGTATAATTGACAAGATAATTCTCCATTGGCAACAAAAAATTG-TGCAAG 144850
Query 101885 AC-ATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAA 101943
|| ||||||||| || | |||||| ||| || || | |||||||||| ||||||
Sbjct 144849 ACAATGACAAGGTGGTAGAGCCATTTGAGGGATATCGACAGGATTCCAAGCAGACATTAT 144790
Query 101944 CATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAAC 102003
|| | | ||| | || || || | || || ||||| | || | | ||| || |
Sbjct 144789 AATACGCCGATCATTTGGATTGTTTCTGATTGTGTCAATTACTTGCTGAAGTTGATCTAT 144730
Query 102004 TCCTTCTCCTTTATAATCGCGCCCAACACCTT-TATATTCTGCTCCGAAATGCCTCCACT 102062
|| || |||| ||| | || || || | || | || || ||||| | |||||
Sbjct 144729 ACCCTCATCTTTGTAA-CTGTCCTTGCAGTTTCTGTACTTGGCCCCAAAATGACGCCACT 144671
Query 102063 GAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTA 102122
|||| ||||| || || || ||||| ||||| || || || |||| ||| ||| ||||
Sbjct 144670 GAAAACCATAAACTGGGCCTAGATCACCTTCCTCCCTATCGGAAAACCCACATTTGTCTA 144611
Query 102123 AAAATGATCTAGAT--CCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTT 102180
| || || ||| | || ||||||| ||||| | | || || |||
Sbjct 144610 AGAA--CTCCCGATTACTGTTTCCATCCCATATGTGAATATTTTTTTCTTGAAGTATTTT 144553
Query 102181 GCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATAC 102240
||| || || | |||||||| || ||||||| | ||| | | |||||||||
Sbjct 144552 AGCGTCTGTTTTACCATGAACAAACCACAGCAATTCTTCAGCGACAGCACGCCAAAATAC 144493
Query 102241 TCTCTTAGTAGTTAAAAGTGGAAA 102264
|| ||| ||||||| | ||||||
Sbjct 144492 TCGCTTCGTAGTTAGTAATGGAAA 144469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361110488141960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |