Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq157 150 1e-31 >seq157 Length=290505 Score = 150 bits (166), Expect = 1e-31 Identities = 412/624 (66%), Gaps = 8/624 (1%) Strand=Plus/Minus Query 101645 GGAAACGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAG 101704 |||||| | ||| ||||||| ||||| ||| | || ||||| |||| |||| Sbjct 145088 GGAAACTCCCGAGGTTTTCGCGTTAACTGTTCTTTTAATGCTTCAATATGATTATTATAG 145029 Query 101705 ATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCA 101764 | || ||||| || | ||| |||| ||| || || || |||| ||| | ||||||| Sbjct 145028 ACATGTGCATCGCCCAAAGTGTGGACAAAATCCCCTGGTCGGAGATCAGTAATATGAGCA 144969 Query 101765 ATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCA 101824 ||||| | || | | || || ||||| |||||||| || || || |||||||| Sbjct 144968 ATCATATAGGTAAGCAAAGCGTACGAGGCAATATTAAATGGTACACCCAATCCCATATCG 144909 Query 101825 GCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAAT 101884 || | ||| || | |||||| || | | ||||| ||| ||||||| || Sbjct 144908 GCACTGCGTTGGTATAATTGACAAGATAATTCTCCATTGGCAACAAAAAATTG-TGCAAG 144850 Query 101885 AC-ATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAA 101943 || ||||||||| || | |||||| ||| || || | |||||||||| |||||| Sbjct 144849 ACAATGACAAGGTGGTAGAGCCATTTGAGGGATATCGACAGGATTCCAAGCAGACATTAT 144790 Query 101944 CATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAAC 102003 || | | ||| | || || || | || || ||||| | || | | ||| || | Sbjct 144789 AATACGCCGATCATTTGGATTGTTTCTGATTGTGTCAATTACTTGCTGAAGTTGATCTAT 144730 Query 102004 TCCTTCTCCTTTATAATCGCGCCCAACACCTT-TATATTCTGCTCCGAAATGCCTCCACT 102062 || || |||| ||| | || || || | || | || || ||||| | ||||| Sbjct 144729 ACCCTCATCTTTGTAA-CTGTCCTTGCAGTTTCTGTACTTGGCCCCAAAATGACGCCACT 144671 Query 102063 GAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTA 102122 |||| ||||| || || || ||||| ||||| || || || |||| ||| ||| |||| Sbjct 144670 GAAAACCATAAACTGGGCCTAGATCACCTTCCTCCCTATCGGAAAACCCACATTTGTCTA 144611 Query 102123 AAAATGATCTAGAT--CCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTT 102180 | || || ||| | || ||||||| ||||| | | || || ||| Sbjct 144610 AGAA--CTCCCGATTACTGTTTCCATCCCATATGTGAATATTTTTTTCTTGAAGTATTTT 144553 Query 102181 GCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATAC 102240 ||| || || | |||||||| || ||||||| | ||| | | ||||||||| Sbjct 144552 AGCGTCTGTTTTACCATGAACAAACCACAGCAATTCTTCAGCGACAGCACGCCAAAATAC 144493 Query 102241 TCTCTTAGTAGTTAAAAGTGGAAA 102264 || ||| ||||||| | |||||| Sbjct 144492 TCGCTTCGTAGTTAGTAATGGAAA 144469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361110488141960