Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq749 100 2e-16
>seq749
Length=113903
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| | ||||| |||||||| ||||| ||||| || ||||| |
Sbjct 710 ATGCAAATCTTCGTTAAAACTTTGACGGGTAAAACAATTACTCTGGAGGTTGAACCTTCC 651
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | || ||||||| || || || ||| | || |||||||
Sbjct 650 GATACAATTGAAAACGTTAAAGCAAAAATTCAGGACAAGGAGGGTATTCCTCCAGATCAA 591
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
||| | | ||||| || || || ||||||||||| || || ||||||||||
Sbjct 590 CAACGTTTAATCTTCGCCGGTAAGCAATTGGAAGACGGACGTACCTTGTCCGATTACAAC 531
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249
|| ||||||||||||||||||||| |||| || ||
Sbjct 530 ATCCAAAAGGAATCTACTCTTCACTTGGTATTGCG 496
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || ||| ||||||| |||||||| |||||||| || || || || |
Sbjct 938 ATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCC 879
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | || |||| |||||| ||||| ||||| | ||| |||||||
Sbjct 878 GATACCATTGAGAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCAA 819
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
||| | | || || || |||||||| ||||| ||| || || |||| || |||
Sbjct 818 CAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGATGGACGCACACTGTCCGACTATAAT 759
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|||||||||||||| ||||| || | || |||| ||||| || ||
Sbjct 758 ATTCAAAAGGAATCCACTCTACATTTAGTTCTACGCTTACGTGGTGG 712
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
||||||||| ||| | || || | || ||||||||||||||| || ||||| |
Sbjct 255 AATGCAAATCTTCGTGAAGACCCTCACTGGCAAAACCATTACCTTGGANGTTGAACCTTC 196
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
||| || | | | | ||| || || ||||| ||||| | ||| ||||||
Sbjct 195 AGATACCATTGAGAACGTTAAGGCTAAGATCCAAGATAAGGAAGGCATTCCCCCAGATCA 136
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213
||| | | ||||| || |||||||||||||| || || || ||||||||||
Sbjct 135 GCAACGTTTGATCTTCGCCGGCAAACAATTGGAGGACGGACGTACCTTGTCCGATTACAA 76
Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249
|| ||||| || |||||||||||| |||| || ||
Sbjct 75 CATCCAAAAAGAGTCTACTCTTCACTTGGTATTGCG 40
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410636789511440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |