Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq749 100 2e-16 >seq749 Length=113903 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | ||||| |||||||| ||||| ||||| || ||||| | Sbjct 710 ATGCAAATCTTCGTTAAAACTTTGACGGGTAAAACAATTACTCTGGAGGTTGAACCTTCC 651 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | || ||||||| || || || ||| | || ||||||| Sbjct 650 GATACAATTGAAAACGTTAAAGCAAAAATTCAGGACAAGGAGGGTATTCCTCCAGATCAA 591 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | ||||| || || || ||||||||||| || || |||||||||| Sbjct 590 CAACGTTTAATCTTCGCCGGTAAGCAATTGGAAGACGGACGTACCTTGTCCGATTACAAC 531 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || ||||||||||||||||||||| |||| || || Sbjct 530 ATCCAAAAGGAATCTACTCTTCACTTGGTATTGCG 496 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || ||| ||||||| |||||||| |||||||| || || || || | Sbjct 938 ATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCC 879 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || |||| |||||| ||||| ||||| | ||| ||||||| Sbjct 878 GATACCATTGAGAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCAA 819 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | || || || |||||||| ||||| ||| || || |||| || ||| Sbjct 818 CAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGATGGACGCACACTGTCCGACTATAAT 759 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||||||||| ||||| || | || |||| ||||| || || Sbjct 758 ATTCAAAAGGAATCCACTCTACATTTAGTTCTACGCTTACGTGGTGG 712 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| ||| | || || | || ||||||||||||||| || ||||| | Sbjct 255 AATGCAAATCTTCGTGAAGACCCTCACTGGCAAAACCATTACCTTGGANGTTGAACCTTC 196 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 ||| || | | | | ||| || || ||||| ||||| | ||| |||||| Sbjct 195 AGATACCATTGAGAACGTTAAGGCTAAGATCCAAGATAAGGAAGGCATTCCCCCAGATCA 136 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||| | | ||||| || |||||||||||||| || || || |||||||||| Sbjct 135 GCAACGTTTGATCTTCGCCGGCAAACAATTGGAGGACGGACGTACCTTGTCCGATTACAA 76 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || ||||| || |||||||||||| |||| || || Sbjct 75 CATCCAAAAAGAGTCTACTCTTCACTTGGTATTGCG 40 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410636789511440