Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq609 120 3e-22
seq749 111 1e-19
seq1128 107 2e-18
seq2732 96.9 3e-15
>seq609
Length=128410
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| |||| || ||||| ||||| |||||||| ||| || || || ||| ||
Sbjct 92952 ACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTACGACCATCTTCC 92893
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
| |||||||| ||| |||| | |||||| ||||| || || || ||||| ||||||
Sbjct 92892 AATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTGTCTTGG 92833
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
||||| ||| || | ||||| |||||| | ||||||||| | ||| | || ||
Sbjct 92832 ATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATGGTCTTA 92773
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || | ||||| || |||||||||||
Sbjct 92772 CCAGTTAAGGTTTTGACGAAAATCTGCAT 92744
>seq749
Length=113903
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | | ||| |||||||| | ||||| || ||||| ||||||||||||
Sbjct 482 TACCACCGCGGAGACGCAATACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCGG 541
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || || || || | || || || ||| |||| | ||| || ||||| ||||
Sbjct 542 ACAAGGTACGTCCGTCTTCCAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGAG 601
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| ||||||| |||||| | ||| | || || | || |
Sbjct 602 GAATACCCTCCTTGTCCTGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAAGGTTCAA 661
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | ||||| || |||| |||||| || || || |||||
Sbjct 662 CCTCCAGAGTAATTGTTTTACCCGTCAAAGTTTTAACGAAGATTTGCAT 710
Score = 104 bits (114), Expect = 2e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | ||| |||||||| | |||||||||||||| ||||||||||||
Sbjct 26 TACCACCACGGAGACGCAATACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGG 85
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || || ||||| | ||||| || ||| |||| | ||| |||||||| || |
Sbjct 86 ACAAGGTACGTCCGTCCTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGG 145
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| ||||| ||||| ||| || || ||||| | || | ||| || | || |
Sbjct 146 GAATGCCTTCCTTATCTTGGATCTTAGCCTTAACGTTCTCAATGGTATCTGAAGGTTCAA 205
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | ||| | |||||||| || || || || || || || |||||
Sbjct 206 CNTCCAAGGTAATGGTTTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 254
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || ||||| | | || || || | || || || |||||||| || || |||
Sbjct 710 TACCACCACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTTTGAATATTATAGTCGG 769
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||||| |||||| | |||||| |||||| | || | ||| || ||||| || |
Sbjct 770 ACAGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGG 829
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||| ||| |||||| ||| || | || | ||| || | ||| |
Sbjct 830 GGATTCCTTCCTTATCTTGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAA 889
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|||| | || | ||||| || |||| |||||| || ||||||||||||
Sbjct 890 CCTCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCATG 939
Score = 93.3 bits (102), Expect = 4e-14
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| || | ||||||||| || || |||||||||||| || |||||| || ||
Sbjct 958 ACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTCTTCC 1017
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| ||||| || || |||| | ||| || ||||| || || || || || |||||| |
Sbjct 1018 AGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTGTCTTGA 1077
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || |||||| | ||| | || || | || | || ||||| | || | || ||
Sbjct 1078 ATCTTAGCTTTAACATTTTCAATAGTATCGGATGGT-TCAACCTCCAGAGTGATGGTCTT 1136
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| |||| || || || || || |||||
Sbjct 1137 GCCAGTCAAGGTCTTCACGAAGATTTGCAT 1166
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
||| |||||||| | |||||||| || || |||||||| ||| || ||||| ||
Sbjct 270 CAATACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAATGTGCGTCCGTC 329
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| | || || || ||| |||| | ||| || ||||| ||||| || |||||||| ||
Sbjct 330 CTCCAATTGCTTACCGGCGAAGATCAAACGTTGTTGATCTGGAGGAATACCCTCCTTATC 389
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| || || || || | || | ||| || | ||| || || | || | ||
Sbjct 390 TTGGATCTTGGCCTTTACGTTCTCAATGGTATCTGAAGGCTCAACTTCCAAAGTGATGGT 449
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||||| || || ||||| || || |||||
Sbjct 450 TTTGCCGGTGAGGGTCTTTACGAAGATTTGCAT 482
>seq1128
Length=88325
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|||||||| | | | |||||| |||| ||| || || || || || ||||| ||| |
Sbjct 337 CCTCCGCGAAGACGTAGCACCAAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGAC 278
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||| || |||||| || || || || ||| |||| | ||| || ||||| || ||
Sbjct 277 AAAGTACGTCCATCCTCAAGTTGCTTGCCGGCGAAGATCAAACGTTGTTGATCTGGTGGG 218
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| |||||||| ||| ||||| ||| || | || | ||| |||| ||| ||
Sbjct 217 ATTCCCTCCTTATCTTGGATTTTGGCTTTGACATTCTCAATGGTATCCGAAGGCTCAACT 158
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | ||||||||||| ||||| || || || || |||||
Sbjct 157 TCCAAGGTGATTGTTTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 111
>seq2732
Length=47336
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|| || || | |||||||||||| ||||| || || || || ||||| ||| ||
Sbjct 1624 ACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCATCTTCC 1683
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
| || ||||| || | || |||||||| ||||| || || || || ||||| ||| |
Sbjct 1684 AATTGCTTTCCGGCAAAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATCTTGA 1743
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
||||| ||||| ||||| | || |||| ||| ||||| | || | || ||
Sbjct 1744 ATTTTGGCCTTAACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGTCTTA 1803
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| || || |||||||| || || ||||| |||
Sbjct 1804 CCCGTAAGGGTTTTTACGAATATTTGCATTGCT 1836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433661417636320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |