Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq892 93.3 8e-14 seq502 86.0 1e-11 >seq892 Length=101496 Score = 93.3 bits (102), Expect = 8e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 189448 TCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACG 189507 |||||||||||| ||||| |||| || | | ||||| ||||||||| ||||| | || Sbjct 64706 TCTATGGAACGCAGCACAACTGCAATTGTTACGTGAAGGCAAAATGCATGGTTTTCTGCG 64765 Query 189508 AATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTT 189561 ||||||||||| || |||||||| || ||| || |||||||| | ||||| Sbjct 64766 TATGTATTGGGCAAAAAAGATACTGGAGTGGTCTTCTACACCTGATGCTGCTTT 64819 Score = 84.2 bits (92), Expect = 4e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 189425 GAAAAAGCGGAAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAA 189484 ||| |||| | || |||||| || ||||| || | ||||| || |||| | ||| Sbjct 69475 GAACAAGCAAATACACATGATGACCTCTGGAATGCTGCTCAAATACAACTGGTTCGTGAA 69534 Query 189485 GGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGA 189544 || |||||||| | ||| | || | ||||||||| || ||||||||||||||| | | Sbjct 69535 GGCAAAATGCACGGATTTCTTCGTAAGTATTGGGCCAAAAAGATACTTGAATGGTCCAAC 69594 Query 189545 ACACCTGAAGACGCTTTGAGTTATAG-TATCTATTTGAACAACAAGTACGAACTAGACGG 189603 |||| ||||| || || | || | || ||||| ||| |||| || |||| || Sbjct 69595 TCACCAGAAGAGGCGCTG-GAAATTGCAATTTATTTAAACGACAAATATAGTTTAGATGG 69653 Query 189604 CACGGATCCTAACGGATACGTAGGT 189628 || || | ||||| || || ||| Sbjct 69654 CAGAGACTCCAACGGTTATGTGGGT 69678 >seq502 Length=142116 Score = 86.0 bits (94), Expect = 1e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 135727 GGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATACAAACAAACCACTC 135786 ||||||||||||||| |||| || | | | ||| | |||||||| | |||| || | Sbjct 107130 GGTATATGCGATAATCTACTCACTTGTGTGGTACGTGCCTGGGACCTACACAAGCCGTTA 107071 Query 135787 ATTTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTACAGAAAAACATATA 135846 | |||||||||||||||||||||| ||||| || || ||| | ||| | |||| ||| Sbjct 107070 CTCTTCTGTCCTGCAATGAATACTCGTATGTACGACCACCCTCTAACATATGAACAAATA 107011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922827982878400