Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq4668 96.9 4e-15 seq664 96.9 4e-15 seq494 95.1 1e-14 seq15327 93.3 5e-14 seq769 91.5 2e-13 seq1840 89.7 6e-13 seq749 82.4 9e-11 >seq4668 Length=29010 Score = 96.9 bits (106), Expect = 4e-15 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 || |||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| Sbjct 26005 AATATTTACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 25946 Query 60118 CACCACTATACTACCGAGGATTG 60140 |||||||||||| |||||| || Sbjct 25945 GACCACTATACTATCGAGGACTG 25923 >seq664 Length=122620 Score = 96.9 bits (106), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 ||||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||| Sbjct 46845 TTTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 46786 Query 60123 CTATACTACCGAGGAT 60138 |||||||| ||||||| Sbjct 46785 CTATACTATCGAGGAT 46770 Score = 96.9 bits (106), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 47515 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 47456 Query 60126 TACTACCGAGGATTGA 60141 ||||| |||||||||| Sbjct 47455 TACTATCGAGGATTGA 47440 Score = 95.1 bits (104), Expect = 1e-14 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 60053 TATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 |||| | || | ||||| || | |||||| |||||| ||||||||||||||||||||| Sbjct 47040 TATGTATAACTATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGG 47099 Query 60113 ATACTCACCACTATACTACCGAGGA 60137 ||||| |||||||||||| |||||| Sbjct 47100 ATACTGACCACTATACTATCGAGGA 47124 >seq494 Length=143403 Score = 95.1 bits (104), Expect = 1e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 ||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||| Sbjct 135075 TTTACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 135016 Query 60122 ACTATACTACCGAGGAT 60138 ||||||||| ||||||| Sbjct 135015 ACTATACTATCGAGGAT 134999 >seq15327 Length=1742 Score = 93.3 bits (102), Expect = 5e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 ||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||| Sbjct 959 TTTACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 900 Query 60122 ACTATACTACCGAGGATTG 60140 ||||||||| |||||| || Sbjct 899 ACTATACTATCGAGGACTG 881 >seq769 Length=112491 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 107108 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 107167 Query 60126 TACTACCGAGGATTG 60140 ||||| |||||| || Sbjct 107168 TACTATCGAGGACTG 107182 >seq1840 Length=63012 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 54222 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 54281 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 54282 TACTATCGAGGA 54293 >seq749 Length=113903 Score = 82.4 bits (90), Expect = 9e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||| ||||| || | || |||||||| || |||||||| | || || || | Sbjct 495 ACGCAATACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCGGACAAGGTACGTCC 554 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || | |||||||| ||||| || | || || || || | || | | |||||| Sbjct 555 GTCTTCCAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATACCCTCCTT 614 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACC-GTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| |||||| || | ||| || || ||| | ||| || || | || | Sbjct 615 GTCC-TGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAAGGTTCAACCTCCAGAGTAA 673 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | ||||| ||||| | || || || ||||||||||| Sbjct 674 TTGTTTTACCCGTCAAAGTTTTAACGAAGATTTGCAT 710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571589158868800