Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq2732 95.1 2e-14 seq1489 93.3 6e-14 >seq2732 Length=47336 Score = 95.1 bits (104), Expect = 2e-14 Identities = 153/228 (67%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||||||| | | ||| ||||| || ||||| ||||| |||||||| || | Sbjct 1606 CCACCTCTAAGACGAAGTACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCC 1665 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | || | | ||| || ||||| ||||| |||||||| | | || ||||| || ||| Sbjct 1666 AATGTGCGACCATCTTCCAATTGCTTTCCGGCAAAAATTAGACGCTGTTGATCAGGCGGA 1725 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 |||||||| |||||||| |||||| ||| || || Sbjct 1726 ATTCCTTCCTTATCTTGAATTTTGGCCTTAACATGTTCAATAGTATCCGAAGGCTCAACC 1785 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 || || ||||| || ||||| || | ||||| | ||||||||||||| Sbjct 1786 TCAAGAGTGATGGTCTTACCCGTAAGGGTTTTTACGAATATTTGCATT 1833 >seq1489 Length=72652 Score = 93.3 bits (102), Expect = 6e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 10407 AAAACTGATTTAATTATAGAAATTCCTAAAGGATGTTATGCAAGATTAGCTCCCAGATCT 10466 || ||||||||| || || |||| | |||| ||| | | | | || || | ||| Sbjct 16283 AAGACTGATTTACAAGTACAAGTTCCAGAGGGATCTTACGGACGTGTTGCGCCACGCTCT 16342 Query 10467 GATTTAGCTCTAAATAAATTTATTGATATTGGAGCTGGAGTAATTGACGAAGATTATAGA 10526 | ||||| | || || ||||| || |||| |||||||| | || ||||| || | Sbjct 16343 GGACTAGCTGTTAAGAACTTTATAGACGTTGGTGCTGGAGTCGTAGATGAAGACTACCGT 16402 Query 10527 GGAAATGTGGGAGTAATATTATTTAATCATTCTAATGAAGATTTTATAATAAATAGAGGA 10586 || || |||| || |||||||||||||||| |||||||||| | | || ||||| Sbjct 16403 GGTAACTTGGGCGTTGTATTATTTAATCATTCAGATGAAGATTTCGAAGTGAAACGAGGA 16462 Query 10587 GATAGAATATCTCAATTAATATGTGA 10612 ||| | || | ||||| || ||||| Sbjct 16463 GATCGCATTGCACAATTTATCTGTGA 16488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743229361203200