Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq225 205 9e-48
>seq225
Length=233467
Score = 205 bits (226), Expect = 9e-48
Identities = 474/706 (67%), Gaps = 10/706 (1%)
Strand=Plus/Minus
Query 16069 ATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAAC 16128
||| ||||||||||| ||||| | ||||| | || ||||| || ||||| || ||
Sbjct 26879 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAAATTCAC 26820
Query 16129 AGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCT 16188
|| | || || ||||| || | | || || ||||| |||||| ||||| ||
Sbjct 26819 CGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCAAC 26760
Query 16189 TACTACACTATTTAACGGAGGGTT-TAATAAGTGTTTAAACATTATACAAGCAAAATCAC 16247
| | | || ||| | || || ||| |||| ||||| | ||| || || ||||
Sbjct 26759 AATT-CGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCAC 26701
Query 16248 AATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTC 16307
|||| | ||| || || | |||| || || |||||||| | |||||||||| |
Sbjct 26700 AATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAAC 26641
Query 16308 CTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTG 16367
| ||||| |||| ||| || || | ||||| ||| ||||| ||||||||||| |
Sbjct 26640 CACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATACCTTCAACGG 26581
Query 16368 CGGCAAATGCAACCAATCGCTCACCGTACGTT---CTAtttttactttctatccattttt 16424
| |||||||||| | || ||||| | ||| | | || | |||||
Sbjct 26580 CAGCAAATGCAATTACACGTTCACCAAA-GTTGGCCGACTTCGAGGAA--ATCCAAGCAA 26524
Query 16425 tagcccaatttgctttttgtttAACA-CAGTTCATGTTCTCTATTGCATTAAATAAATAA 16483
||||||| ||| || | || || ||| ||| ||||||| ||||| ||||| |||
Sbjct 26523 GCGCCCAATCTGCCTTACGCTTTACGGCAGG-CATTGTCTCTATAGCATTGAATAAGTAA 26465
Query 16484 tttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGA 16543
|| ||| ||| || |||||| ||||| |||| || ||||||||||| |||||
Sbjct 26464 TTCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATGC 26405
Query 16544 ATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCA 16603
| ||||||||| || || ||||| ||||| ||||| | || || | | ||| |||||
Sbjct 26404 ACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTCC 26345
Query 16604 GAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCA 16663
| | || | ||| ||| ||||| || || || ||||| || || ||||| ||
Sbjct 26344 TGGCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGCT 26285
Query 16664 AGTATGTGTTTAATAAAAtttttttCGTTATCTGAAAGTTTTAACCAGTCAGAAAAATCT 16723
| | |||| |||||||| | ||| ||||| | || | ||| ||| | ||||
Sbjct 26284 AACACGTGTGAAATAAAATGTCGTTCATTATCAGTTAGACGTGCCCAATCATCCATATCT 26225
Query 16724 TTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCT 16769
|| || | ||| || || |||| ||||| || || || | ||||
Sbjct 26224 TTAGAAAGATCTACTTCCCCTACTGTCCAGAACGATGCTTCTGCCT 26179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462327226456000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |