Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq157 156 3e-33 >seq157 Length=290505 Score = 156 bits (172), Expect = 3e-33 Identities = 408/620 (66%), Gaps = 2/620 (0%) Strand=Plus/Plus Query 20033 TGAGAAATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAG 20092 || ||||| ||||| ||| |||||||||| || ||||||||| | || | ||||| Sbjct 144458 TGCGAAATAGTTTTCCATTACTAACTACGAAGCGAGTATTTTGGCGTGCTGTCGCTGAAG 144517 Query 20093 AGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTA 20152 | || | |||||| || | || |||| | ||| ||| ||||||| || Sbjct 144518 AATTGCTGTGGTTTGTTCATGGTAAAACAGACGCTAAAATACTTCAAGAAAAAAATATTC 144577 Query 20153 AGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTC 20212 | || ||| | | | | | | | || ||| ||| ||| ||| | | | Sbjct 144578 ACATATGGGATGGAAACAGTAATCGGGAGTTCTTAGACAAATGTGGGTTTTCCGATAGGG 144637 Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272 | || || ||| | || || || ||||| ||||| ||| | |||||||| || | || Sbjct 144638 AGGAAGGTGATCTAGGCCCAGTTTATGGTTTTCAGTGGCGTCATTTTGGGGCCAAGTACA 144697 Query 20273 TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATT 20332 || || | ||| | | || |||||||| | || | || ||| | Sbjct 144698 GAAACTGCAAGGACAGTTACAAAGATGAGGGTATAGATCAACTTCAGCAAGTAATTGACA 144757 Query 20333 TAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATG 20392 ||| | || || ||||| || | | ||||| | | || ||||| || ||| Sbjct 144758 CAATCAGAAACAATCCAAATGATCGGCGTATTATAATGTCTGCTTGGAATCCTGTCGATA 144817 Query 20393 TGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAAT 20451 | ||| ||||||| | || || |||||| || ||| ||||||| ||||| ||| Sbjct 144818 TCCCTCAAATGGCTCTACCACCTTGTCATTGTCT-TGCACAATTTTTTGTTGCCAATGGA 144876 Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511 ||||| || |||||| | || ||||| || ||||||||| ||||||| || || ||| Sbjct 144877 GAATTATCTTGTCAATTATACCAACGCAGTGCCGATATGGGATTGGGTGTACCATTTAAT 144936 Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGT 20571 ||||| || || ||||||| ||||||||||| ||| |||| ||| | | | || Sbjct 144937 ATTGCCTCGTACGCTTTGCTTACCTATATGATTGCTCATATTACTGATCTCCGACCAGGG 144996 Query 20572 GACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAA 20631 || || |||||||| | || || || ||| | || ||||||||| ||| | |||||| Sbjct 144997 GATTTTGTCCACACTTTGGGCGATGCACATGTCTATAATAATCATATTGAAGCATTAAAA 145056 Query 20632 TTACAGTTAACACGACAACC 20651 ||||||||| ||| |||| Sbjct 145057 GAACAGTTAACGCGAAAACC 145076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399028512842200