Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq157 156 3e-33
>seq157
Length=290505
Score = 156 bits (172), Expect = 3e-33
Identities = 408/620 (66%), Gaps = 2/620 (0%)
Strand=Plus/Plus
Query 20033 TGAGAAATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAG 20092
|| ||||| ||||| ||| |||||||||| || ||||||||| | || | |||||
Sbjct 144458 TGCGAAATAGTTTTCCATTACTAACTACGAAGCGAGTATTTTGGCGTGCTGTCGCTGAAG 144517
Query 20093 AGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTA 20152
| || | |||||| || | || |||| | ||| ||| ||||||| ||
Sbjct 144518 AATTGCTGTGGTTTGTTCATGGTAAAACAGACGCTAAAATACTTCAAGAAAAAAATATTC 144577
Query 20153 AGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTC 20212
| || ||| | | | | | | | || ||| ||| ||| ||| | | |
Sbjct 144578 ACATATGGGATGGAAACAGTAATCGGGAGTTCTTAGACAAATGTGGGTTTTCCGATAGGG 144637
Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272
| || || ||| | || || || ||||| ||||| ||| | |||||||| || | ||
Sbjct 144638 AGGAAGGTGATCTAGGCCCAGTTTATGGTTTTCAGTGGCGTCATTTTGGGGCCAAGTACA 144697
Query 20273 TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATT 20332
|| || | ||| | | || |||||||| | || | || ||| |
Sbjct 144698 GAAACTGCAAGGACAGTTACAAAGATGAGGGTATAGATCAACTTCAGCAAGTAATTGACA 144757
Query 20333 TAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATG 20392
||| | || || ||||| || | | ||||| | | || ||||| || |||
Sbjct 144758 CAATCAGAAACAATCCAAATGATCGGCGTATTATAATGTCTGCTTGGAATCCTGTCGATA 144817
Query 20393 TGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAAT 20451
| ||| ||||||| | || || |||||| || ||| ||||||| ||||| |||
Sbjct 144818 TCCCTCAAATGGCTCTACCACCTTGTCATTGTCT-TGCACAATTTTTTGTTGCCAATGGA 144876
Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511
||||| || |||||| | || ||||| || ||||||||| ||||||| || || |||
Sbjct 144877 GAATTATCTTGTCAATTATACCAACGCAGTGCCGATATGGGATTGGGTGTACCATTTAAT 144936
Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGT 20571
||||| || || ||||||| ||||||||||| ||| |||| ||| | | | ||
Sbjct 144937 ATTGCCTCGTACGCTTTGCTTACCTATATGATTGCTCATATTACTGATCTCCGACCAGGG 144996
Query 20572 GACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAA 20631
|| || |||||||| | || || || ||| | || ||||||||| ||| | ||||||
Sbjct 144997 GATTTTGTCCACACTTTGGGCGATGCACATGTCTATAATAATCATATTGAAGCATTAAAA 145056
Query 20632 TTACAGTTAACACGACAACC 20651
||||||||| ||| ||||
Sbjct 145057 GAACAGTTAACGCGAAAACC 145076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399028512842200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |