Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq749 116 3e-21 seq1128 93.3 3e-14 seq609 93.3 3e-14 >seq749 Length=113903 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 ||||||||||| || || ||||||||| |||||||||||| || | ||| |||| Sbjct 271 AATACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAATGTGCGTCCGTCC 330 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| ||| || |||||||| ||||| || ||||| || ||||| | ||||||||| || Sbjct 331 TCCAATTGCTTACCGGCGAAGATCAAACGTTGTTGATCTGGAGGAATACCCTCCTTATCT 390 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || ||| || | | | | | || | ||| || |||| || || || Sbjct 391 TGGATCTTGGCCTTTACGTTCTCAATGGTATCTGAAGGCTCAACTTCCAAAGTGATGGTT 450 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || || ||||| || ||||||||||| Sbjct 451 TTGCCGGTGAGGGTCTTTACGAAGATTTGCAT 482 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 ||||||||||| || || ||||| || |||||||| ||| || || |||| Sbjct 499 AATACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCGGACAAGGTACGTCCGTCT 558 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| ||| || |||||||| || || || ||||| || ||||| | ||||||||||||| Sbjct 559 TCCAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATACCCTCCTTGTCC 618 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||||||| ||||| | | | || | || ||||||| ||||| || Sbjct 619 TGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAAGGTTCAACCTCCAGAGTAATTGTT 678 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||||| ||| || || ||||||||||| Sbjct 679 TTACCCGTCAAAGTTTTAACGAAGATTTGCAT 710 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 ||||||||||| || || ||| || || |||||||| ||| || || |||| Sbjct 43 AATACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGACAAGGTACGTCCGTCC 102 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| |||||| |||||||| ||||| || || || || || || | || ||||| || Sbjct 103 TCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCCTTATCT 162 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || |||||| | | | | | || | || || |||| |||||| || Sbjct 163 TGGATCTTAGCCTTAACGTTCTCAATGGTATCTGAAGGTTCAACNTCCAAGGTAATGGTT 222 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || || |||||||| ||||||||||| Sbjct 223 TTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 254 >seq1128 Length=88325 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || || |||||||| || ||||||||| || || | || || Sbjct 319 ACCAAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGACAAAGTACGTCCATCCTCA 260 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| || |||||||| ||||| || ||||| || || || | |||||||| || Sbjct 259 AGTTGCTTGCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCCTTATCTTGG 200 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| || || | | | | | ||| | ||| || |||| ||| || || ||| Sbjct 199 ATTTTGGCTTTGACATTCTCAATGGTATCCGAAGGCTCAACTTCCAAGGTGATTGTTTTG 140 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || ||||||||||| ||||||||||| Sbjct 139 CCGGTGAGAGTCTTCACGAAGATTTGCAT 111 >seq609 Length=128410 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || || |||||| || |||||||||||| || ||| | || ||| Sbjct 92952 ACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTACGACCATCTTCC 92893 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | ||||||||||||||| ||||| |||||||| || || || | |||||| ||||| Sbjct 92892 AATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTGTCTTGG 92833 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| || || | | | |||| | ||| ||||| | ||| || ||||| Sbjct 92832 ATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATGGTCTTA 92773 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGC 45341 || || | || || || || || ||||| |||| Sbjct 92772 CCAGTTAAGGTTTTGACGAAAATCTGCATTTTGC 92739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394921313271160