Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2732 105 5e-18 seq609 98.7 8e-16 seq749 91.5 1e-13 >seq2732 Length=47336 Score = 105 bits (116), Expect = 5e-18 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 |||||| | || | ||| || ||||| ||||| || ||||| |||| ||| || ||| Sbjct 1620 AAGTACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCCAATGTGCGACCATC 1679 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||||||| || || ||| | || || | |||||||| || | ||||||||||| Sbjct 1680 TTCCAATTGCTTTCCGGCAAAAATTAGACGCTGTTGATCAGGCGGAATTCCTTCCTTATC 1739 Query 18233 GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 ||||| ||| || ||| ||| ||| || ||||| |||| |||||| | Sbjct 1740 TTGAATTTTGGCCTTAACATGTTCAATAGTATCCGAAGGCTCAACCTCAAGAGTGATGGT 1799 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAAC--TCTTATAAA 18342 || || || | |||||||| || ||||||||| | ||| ||||| ||| Sbjct 1800 CTTACCCGTAAGGGTTTTTACGAATATTTGCATTGCTGAACAATCTTACAAA 1851 >seq609 Length=128410 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| || || ||||| || ||||| ||||||||||||| || || || |||| Sbjct 92955 AGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTACGACCATCT 92896 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 ||||||||||| || || |||| | | |||||||| ||| | || || || || Sbjct 92895 TCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTGTCT 92836 Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 |||| | || ||||| | | | | |||||| |||||| || | ||||||| | Sbjct 92835 TGGATTT-TAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATGGT 92777 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 || || || || ||||| || ||||| |||||||| Sbjct 92776 CTTACCAGTTAAGGTTTTGACGAAAATCTGCATTTT 92741 >seq749 Length=113903 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 || || || ||||| |||||||| || ||||||| || ||| | ||| ||||| ||| Sbjct 736 TGTAGAGTGGATTCCTTTTGAATATTATAGTCGGACAGTGTGCGTCCATCCTCCAACTGT 795 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 ||||| || | || | | ||||||||| ||| | ||||||||||| ||||| | Sbjct 796 TTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTTGAATTT-T 854 Query 18243 TGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 || ||||| | ||| || || ||||| || | |||||| |||| || || Sbjct 855 AGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTTCCCGT 914 Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325 ||| ||||| || ||||| ||||| Sbjct 915 CAAAGTTTTGACGAAAATCTGCAT 938 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || ||||| | ||| |||| |||||||| || || || || |||||||| |||| | Sbjct 940 CCACCACGTAGACGAAGAACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGAC 999 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||||||| |||||| || ||| |||| | | ||||||||| ||| Sbjct 1000 AGAGTGCGTCCGTCTTCCAGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGG 1059 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACC-TGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| || || ||| | | |||| | | | | ||| ||| || || || Sbjct 1060 ATTCCTTCTTTGTCTTGAATCT-TAGCTTTAACATTTTCAATAGTATCGGATGGTTCAAC 1118 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 || | |||||| | ||||| ||||| || || || || ||||||||||| Sbjct 1119 CTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCATTTT 1169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379196240770200