Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq291 504 6e-138 seq225 228 7e-55 seq749 113 4e-20 seq2732 89.7 5e-13 >seq291 Length=196152 Score = 504 bits (558), Expect = 6e-138 Identities = 1293/1954 (66%), Gaps = 52/1954 (3%) Strand=Plus/Minus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 || ||||| ||||| ||||| || ||||| || ||||| || || | |||||||||||| Sbjct 78048 TTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCA 77989 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225 ||||| ||||| |||||| |||| |||||||| || || | || ||||| | ||| Sbjct 77988 GTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTGAGCTTACCATAGTTGGGC 77929 Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285 ||| || | ||||||||||||||||||||||| || || || ||||| || ||| Sbjct 77928 TCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCACGATCTGCAGCC 77869 Query 22286 ATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCT 22345 || || ||| |||| || || || ||||| || || ||||| || | | || | Sbjct 77868 ATTTTGATCGATGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGTGC 77809 Query 22346 AACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATC 22405 ||||| ||||| || | || | ||| ||| | || ||| || ||| || || Sbjct 77808 TGTGGTATGGATTCAATATTTTGTATGGATCCGCGACTGGTTATAATATTATTCTTCATA 77749 Query 22406 GTATCGTTCCACA-AACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTG 22464 ||| | ||||| ||| | |||| | ||| | || ||| | || || ||||| Sbjct 77748 TCATCATCCCACAGNACCCAACTCGGTTAGATCGCGTAACAAGTGATGATTTACAACTTG 77689 Query 22465 AAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTC 22524 ||| || || || | || || ||| ||||| ||||| ||| ||||||| || || || Sbjct 77688 AAATTCACCCGAAAGCACACGACGTGTATAAATATTGGAAGTGTACGGTTCAAATGACTC 77629 Query 22525 ATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTT 22584 |||||| |||| || || || || ||||| || ||||| ||||| | ||| | ||||| Sbjct 77628 ATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCGCAAGCAGCAAAGAGTT 77569 Query 22585 TCTCAAGCC---GTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGA 22641 | | || |||||| ||||| ||| | | ||| | ||| ||||| | Sbjct 77568 GCGGACACCATGTTGCTTT---ATTTTCTCCTTCAATTCGGTCCAATTCCAAAGATCAGT 77512 Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 || || || |||||||| || || || | | || ||| | || |||| Sbjct 77511 TGGTGT---TTTATCCCACATGTCATACTGTAGAATACCCTTACTAACGGGTGAACCTTT 77455 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761 |||||||| || | ||||| | | || | |||||| || || ||||| ||||| || Sbjct 77454 ATACGTTTCATAGGTGCCATAGTTTTCAGCTAATTCGCAACTGGCTTCCAAGGCGCCATA 77395 Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCAT 22821 || ||||| ||||| |||| || ||||| | || | | |||||||| || Sbjct 77394 GTAAATAGTTTCGAATATTTGCTGATTCAAACGGAATGCTTCTTCACTTTCGTATGGGTA 77335 Query 22822 ACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTT 22881 |||||| | | || ||||| || | ||| || | ||| ||||| || || || | | | Sbjct 77334 ACGCATTAGAATTAAAGCGTCGGCAAAACCTTGTATGCCAATACCAATGGGACGATGTCT 77275 Query 22882 CAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAA 22941 | |||||| ||||||| ||||| ||||| ||| || || || | |||| Sbjct 77274 GAAATTCGATTTCCTTGCCTCCGGCAAGGGATAATGATTAATGTCTATGATTTTATTCAG 77215 Query 22942 GTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACG----CCCG 22997 || | || || | || || | | |||||| | ||| | || Sbjct 77214 ATTACGTGTAACGGTCTTTGTGACTTCTTTGAGGCGCTTAAAGTC--ATACGTTTTCTCG 77157 Query 22998 ATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTT 23057 ||| |||||| | || | ||||||||| || | ||||| || || ||||| || Sbjct 77156 GGTGT--GACAAACATATTCAAGGCGATCGAAGCCAAGTTGCACACAGCTACCTCATCGG 77099 Query 23058 TGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGC 23117 |||| || || |||||||||||||||| ||| |||||||| || ||||| | ||| Sbjct 77098 GTGACGAATATTCCACAATTTCGGTACATAAATTACTACACTTAATTGTGCCAACATTCT 77039 Query 23118 TCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGA 23177 || || || |||||||| || | ||| || || | |||||| || ||||| ||||| | Sbjct 77038 GTTGATTACTCTTTCGATTACAAGCATCTTTATACAACATGTATGGTGTGCCGGTCTCCA 76979 Query 23178 CCTGCGACTCGATGATCGCT-CGCCACATAGTCTGAGCGTGAA-----CACGTCGCACGT 23231 | ||||| || || || ||| ||| | | | || || | | | |||||| Sbjct 76978 CTTGCGATTCAATAAT-GCTAAACCAAAGACTTTGTGCTTTTATTTTCTTATTGGCACGT 76920 Query 23232 ACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGG 23291 ||||| | || || || | || ||| || || || |||| | || Sbjct 76919 -----CCTTCCTGTTCATATTTCAGATATAACTTTTCGAACTCTTCACCCCATACTTCAT 76865 Query 23292 CCAGGCCGGG-CGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGT 23350 | ||||| | ||| | |||||||| || ||| | || ||| || ||| Sbjct 76864 GTAAACCGGGACACTTGTGT-GGACACATTAGCGACCAGTCTTCATCGGCTTCTACACGT 76806 Query 23351 CTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCT 23410 ||||||| ||||| |||||||||| || ||||||| || | |||||| ||| ||| Sbjct 76805 TTCATAAATAGATCAGGTATCCATAAGGCATAGAACAAATCTCTGGCGCGATGCTCTTCT 76746 Query 23411 TTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGG 23470 ||||| ||||| |||||||| |||||||| || || | || |||||||| || || ||| Sbjct 76745 TTGCCAGTGTTTTTTTTCAATTCCAAAAATTCGAAAATATCAGCATGCCATGGTTCCAGG 76686 Query 23471 TAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTG 23530 || | |||||| ||||| |||| ||| ||| || ||||| || || || || | || Sbjct 76685 TAGATGGCAAAGGCGCCTGGTCGTTTACCGCCACCTTGATCCACATAGCGTGCTATATTA 76626 Query 23531 TTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTC 23590 ||| |||||| | ||| ||||| | ||| || || | || | | ||||| | Sbjct 76625 TTGAACACTCGCAACATAGGCACCAAACCATTTGATGTGCTATTTGTAC---CCACAATT 76569 Query 23591 GAA---CCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGAT 23647 | | |||||||| || | | || |||| | ||| || || || | ||||| || Sbjct 76568 GCAGTGCCTTTTGCACGTATGCAATGTACGTTCAGACCAATACCGCCAGCAGATTTGGAA 76509 Query 23648 ATCATCGCGCATTG--TTTCAGAGTGTCGTAGATGCCCTCGATG---CTGTCCTCTTTGG 23702 |||| || ||||| | |||| ||| | | || || || ||| |||| | ||| Sbjct 76508 ATCAATGCACATTGATGTGCAGA-TGT-GAAAATACCATCAATGGAATCGTCCACCATGG 76451 Query 23703 TCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCG 23762 || | | || || || |||| ||||| | || || || | ||| || || | Sbjct 76450 TC---AGTAGAAAGCATGATGACAATTGCGGCTGCTTAGTGGCAGCAGCGAAAAGCGTTG 76394 Query 23763 GGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAA 23822 | || || ||||| || | | || | | ||||| || ||||| || ||||| | Sbjct 76393 GAGAAGCATGTGTAAAATAACGTTCGGAAAGCAAGTTGTAAGTTTCGATTGCTGCATCGA 76334 Query 23823 TGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCG 23882 |||| || || |||||||||||||| || ||||| | ||| | || |||| ||| || Sbjct 76333 TGTCTTCGCCATGTATACCGATGGCAACACGCATTAACATATGCTGTGGTCGCTCAACAA 76274 Query 23883 TGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCAT 23942 | |||||| | ||| | || ||| ||||||| | ||||||||| |||||||| | || Sbjct 76273 TTTTGCCGTTCAATTTTAGCAAATAGGAACGTTCAAGCGTTTTAAAACCAAAATAATTAT 76214 Query 23943 AGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGC--GAT 24000 | ||| || || | | | ||||| || || || | | ||||| | || | Sbjct 76213 AACCAAAATCGCGGGCATAAATAATGGCAGAGTTTAAGCAATCAGCATT--CTGCTTTAC 76156 Query 24001 GATGTTGTAATGAAAATTCGATATCATCGGCGTT 24034 || || |||||||| | |||||| || || ||| Sbjct 76155 GACATTATAATGAAAGTCCGATATTATAGGAGTT 76122 Score = 152 bits (168), Expect = 5e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 || ||||| ||||| ||||| || ||||| || ||||| || || | |||||||||||| Sbjct 85124 TTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCA 85065 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225 ||||| ||||| |||||| |||| |||||||| || || | || ||||| | ||| Sbjct 85064 GTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTGAGCTTACCATAGTTGGGC 85005 Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285 ||| || | ||||||||||||||||||||||| || || || ||||| || ||| Sbjct 85004 TCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCACGATCTGCAGCC 84945 Query 22286 ATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAG 22332 || || ||| |||| || || || ||||| || || ||||| || Sbjct 84944 ATTTTGATCGATGTTTTCACGGAAATCTCCCAAACTGTTTTGTATAG 84898 >seq225 Length=233467 Score = 228 bits (252), Expect = 7e-55 Identities = 386/551 (70%), Gaps = 16/551 (3%) Strand=Plus/Plus Query 57589 AGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATT 57648 |||||||||||||||| ||||| || | |||||||| || ||||| ||| || |||| Sbjct 26179 AGGCAGAAGCATCGTTCTGGACAGTAGGGGAAGTAGATCTTTCTAAAGATATGGATGATT 26238 Query 57649 GGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCG 57708 ||| || | || ||| || |||||||| ||||||||| || |||||||||| Sbjct 26239 GGGCACGTCTAACTGATAATGAACGACATTTTATTTCACACGTGTTAGCCTTTTTCGCCG 26298 Query 57709 CATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGA 57768 |||| ||||||||||| || || ||| | || ||| | || | || ||||| ||||||| Sbjct 26299 CATCTGATGGTATTGTGAATGAAAATGTAGTTGAACGCTTCTGCCAGGAAGTCCAAGTGA 26358 Query 57769 CGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGT 57828 | ||||| | ||||| || ||||||||| | || || || || |||||||| ||||||| Sbjct 26359 CAGAGGCACGTTGCTTCTATGGATTTCAAATTGCGATGGAGAATGTGCATTCTGAAATGT 26418 Query 57829 ATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTA-GAC-TGTTCAA 57886 || || | || ||||| || | |||||| ||| | ||| | | || | ||||| Sbjct 26419 ATAGCATATTAATTGATACATATATTAAGGAC-TCGA-AACAAAGGAATTACTTATTCAA 26476 Query 57887 CGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATCAAATGGAT 57943 || || || |||||||| || || ||| |||||||| ||| | | ||||| Sbjct 26477 TGCTATAGAGACAATGCCTGC---CGTAAAGCGTAAGGCAGATTGGGCGCTTGCTTGGAT 26533 Query 57944 AAAAAGCGCCA---CGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGG 58000 | | | |||||| || | || | |||| || || || ||||| ||||| Sbjct 26534 ---TTCCTCGAAGTCGGCCAACTTTGGTGAACGTGTAATTGCATTTGCTGCCGTTGAAGG 26590 Query 58001 TATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCC 58060 ||| ||||| ||||| ||||| | || || ||| | |||||||| || | ||||| Sbjct 26591 TATTTTCTTCAGTGGCAGTTTTGCTTCGATCTTCTGGCTTAAGAAACGTGGTTTAATGCC 26650 Query 58061 CGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGC 58120 ||| |||| ||| ||| || | || || || || ||||| || ||| ||| || || Sbjct 26651 AGGCTTGACATTTTCCAATGAACTAATTTCACGAGATGAGGGACTTCATTGTGACTTCGC 26710 Query 58121 GTGCCTAATGT 58131 || | |||| Sbjct 26711 ATGTTTGATGT 26721 >seq749 Length=113903 Score = 113 bits (124), Expect = 4e-20 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| || ||| |||| || ||||| ||||| | || ||||| || || Sbjct 939 CATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTC 880 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | | || | |||||| | ||| || |||||||| | || || || || Sbjct 879 CGATACCATTGAGAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCA 820 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 || ||| | || |||||||||||||||||||| || | | | || || ||| |||| Sbjct 819 ACAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGA-TGGACGCACACTGTCCGACTATA 761 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | |||||||| ||||| ||||| ||| | || || Sbjct 760 ATATTCAAAAGGAATCCACTCTACATTTAGTTCT 727 >seq2732 Length=47336 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| |||||||| || || || || || || ||||| | || ||||| || || Sbjct 1832 ATGCAAATATTCGTAAAAACCCTTACGGGTAAGACCATCACTCTTGAGGTTGAGCCTTCG 1773 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | ||| || || | ||| || |||||||| | ||||| || || Sbjct 1772 GATACTATTGAACATGTTAAGGCCAAAATTCAAGATAAGGAAGGAATTCCGCCTGATCAA 1713 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||||||||| || || || || || |||||||| | || || || ||||| Sbjct 1712 CAGCGTCTAATTTTTGCCGGAAAGCAATTGGAAGATGGTCGCACATTGGCTGACTATAAT 1653 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| ||||| || || | ||| | |||||| | || || || || Sbjct 1652 ATTCAGAAAGAGTCTACATTGCATTTAGTACTTCGTCTTAGAGGTGG 1606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445588316323200