Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq157 167 5e-36 seq225 109 1e-18 >seq157 Length=290505 Score = 167 bits (184), Expect = 5e-36 Identities = 443/669 (66%), Gaps = 11/669 (2%) Strand=Plus/Plus Query 35153 GATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCCAAATGAGGTTCTCTCTTCGA 35212 ||| ||||||| || || | ||| ||||||| |||||||| | ||| ||| ||| Sbjct 144403 GATCGAACTGGTGTTGGTACACGATCAGTTTTTGGTGCCCAAATGCGCTTCGATCTGCGA 144462 Query 35213 GACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAA 35272 | | | ||||| | || ||||| ||| | | || ||| | | || | |||||| Sbjct 144463 AAT---AGTTTTCCATTACTAACTACGAAGCGAGTATTTTGGCGTGCTGTCGCTGAAGAA 144519 Query 35273 CTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATA--C 35330 | |||||| | || || |||||||| ||| | | |||||| || ||| | Sbjct 144520 TTGCTGTGGTTTGTTCATGGTAAAACAGACGCTAAAATACTT--CAAGAAAAAAATATTC 144577 Query 35331 ACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAG 35390 |||| ||| | | || | ||||| || || |||| | ||||| | |||||| | Sbjct 144578 ACATATGGGATGGAAACAGTAATCGGGAGTTCTTAGACAAATGTGGGTTTTCCGATAGGG 144637 Query 35391 CAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATG 35450 || || ||| | || || || || || || || |||||||||||||| || | || Sbjct 144638 AGGAAGGTGATCTAGGCCCAGTTTATGGTTTTCAGTGGCGTCATTTTGGGGCCAAGTACA 144697 Query 35451 ATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAA-TTGGCCAATATACTAAAG 35509 | ||| | ||| | | ||||||| |||||| || ||| || | | Sbjct 144698 GAAACTGCAAGGACAGTTACAAAGATGAGGGTATAGATCAACTTCAGCAAG-TAATTGAC 144756 Query 35510 ACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGAT 35569 || | ||| | |||||| ||||| | | || || ||| | || ||||||||| | ||| Sbjct 144757 ACAATCAGAAACAATCCAAATGATCGGCGTATTATAATGTCTGCTTGGAATCCTGTCGAT 144816 Query 35570 CTTCACCTTATGGCTCTTCCTCCATGCCACATGACT-GCTCAATTTTATGTGGCTAATGG 35628 | | | |||||||| || || || || || || || ||||||| ||| || ||||| Sbjct 144817 ATCCCTCAAATGGCTCTACCACCTTGTCAT-TGTCTTGCACAATTTTTTGTTGCCAATGG 144875 Query 35629 AGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAA 35688 |||||| || || || || || || || || | ||| | || ||||| || || || || Sbjct 144876 AGAATTATCTTGTCAATTATACCAACGCAGTGCCGATATGGGATTGGGTGTACCATTTAA 144935 Query 35689 TATTGCATCATACTCTCTTCTGACTCATCTGATGGCCAGTATGGTGGGTCTAAAACCGGG 35748 |||||| || ||| || | || || || |||| || ||| | ||| ||| || Sbjct 144936 TATTGCCTCGTACGCTTTGCTTACCTATATGATTGCTCATATTACTGATCTCCGACCAGG 144995 Query 35749 AGAGTTTATCCTCACTCTTGGTGACGCACACATTTATAATACCCACATTGAGGTGTTAAA 35808 || ||| ||| |||| | || || ||||| | ||||||| || ||||| | ||||| Sbjct 144996 GGATTTTGTCCACACTTTGGGCGATGCACATGTCTATAATAATCATATTGAAGCATTAAA 145055 Query 35809 GAAGCAGTT 35817 | ||||| Sbjct 145056 AGAACAGTT 145064 >seq225 Length=233467 Score = 109 bits (120), Expect = 1e-18 Identities = 213/314 (68%), Gaps = 3/314 (1%) Strand=Plus/Plus Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978 |||| |||||||| |||||||| || ||||| ||||| || || || || |||||| Sbjct 26569 TTGCATTTGCTGCCGTTGAAGGTATTTTCTTCAGTGGCAGTTTTGCTTCGATCTTCTGGC 26628 Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038 | ||||| | ||| | |||| || | || | |||||||| | ||||| | || | Sbjct 26629 TTAAGAAACGTGGTTTAATGCCAGGCTTGACATTTTCCAATGAACTAATTTCACGAGATG 26688 Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCAT 102098 | || |||||| | ||||| ||||| || |||| || | ||| | | | ||| Sbjct 26689 AGGGACTTCATTGTGACTTCGCATGTTTGATGTTCCAACA---TTTAATACAAAAACCAA 26745 Query 102099 CAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCA 102158 | || | ||| ||||||| | ||||||| || |||||| || ||||| | | Sbjct 26746 GTAATGAGCGAATTGTTGAAATAATTTCTGAAGCTGTTAAAATTGAGCAGGAATTCTTAA 26805 Query 102159 CAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTG 102218 | | | |||| || || ||| | || ||||| ||||| | ||| | | || || | Sbjct 26806 CTGACGCTTTGCCGGTGAATTTAATCGGTATGAATTGCAAACTAATGTCCGATTATATCG 26865 Query 102219 AATTTGTGGCAGAT 102232 |||||||||| ||| Sbjct 26866 AATTTGTGGCTGAT 26879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989178777721800