Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq291 495 5e-135
seq225 253 3e-62
>seq291
Length=196152
Score = 495 bits (548), Expect = 5e-135
Identities = 1242/1851 (67%), Gaps = 49/1851 (3%)
Strand=Plus/Minus
Query 62067 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62126
|| ||||||||||| | ||| ||||| || || || ||||| |||| ||||| |||
Sbjct 78018 GCTGGTTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 77959
Query 62127 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62186
|| ||| || || || ||| | || || || | || || || | || |||||
Sbjct 77958 TGTATAGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 77899
Query 62187 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT-GATCGTCTTTTGTGCAATTTC 62245
||||||||||| || || | |||||||||||||| || ||| || || | ||| ||
Sbjct 77898 TGATCGATGAATGCACCACGATCTGCAGCCATTTTGATCGAT-GTTTTCACGGAAATCTC 77840
Query 62246 CCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAA-GGTTTG--TATTCTGAATGG 62301
||||| |||||| || | |||| || | | | ||| | || || |||| || ||||
Sbjct 77839 CCAAACAGTTTTGTATAGATCGCGTA-TGTGCTGTGGTATGGATTCAATATTTTGTATGG 77781
Query 62302 ATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT-CTCGGTT 62360
|||| | | ||||| ||||||| || ||||||| ||| | | |||||||
Sbjct 77780 ATCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAGNACCCAACTCGGTT 77721
Query 62361 AAAACTC-TAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGT 62419
| | | | ||| || || | || || ||||| ||||| || || | || | || ||
Sbjct 77720 AGATCGCGTAACAAG-TGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGT 77662
Query 62420 GTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGA 62479
|||||||| || |||||||| | |||||||| || |||| |||||| || |||||
Sbjct 77661 ATAAATATTGGAAGTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGA 77602
Query 62480 TGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTC--TGATTTTA 62537
||||| ||||| || || | || ||| || | | ||| ||||| | |||||
Sbjct 77601 AGCAGTTGGCATGGGCGCAAGCAGCAAAGAGTTGCGGACACC--ATGTTGCTTTATTTTC 77544
Query 62538 TCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGT 62597
|| || | | ||||||||||||||| | ||| | ||| |||
Sbjct 77543 TCCTTCAATTCGGTCCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTGT 77484
Query 62598 AGAATACCGTTACTGGCGTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCT 62657
|||||||| ||||| || || ||| ||| || ||||| | || | || ||||||
Sbjct 77483 AGAATACCCTTACTAACGGGTGAACCTTTATACGTTTCATAGGTGCCATAGTTTTCAGCT 77424
Query 62658 AGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGA 62717
| || ||||| || || || || || || ||||| ||||| || || | || ||| | |
Sbjct 77423 AATTCGCAACTGGCTTCCAAGGCGCCATAGTAAATAGTTTCGAATATTTGCTGATTCAAA 77364
Query 62718 TCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCT 62777
|||||| || || |||| ||| | ||||| || ||||| || || |||
Sbjct 77363 CGGAATGCTTCTTCACTTTCGTATGGGTAACGCATTAGAATTAAAGCGTCGGCAAAACCT 77304
Query 62778 TGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCA--GCTTCTGGAATAG 62835
|| | |||||||| || || | |||||| ||| || |||| || || || | |
Sbjct 77303 TGTATGCCAATACCAATGGGACGATGTCTGAAATTCGA--TTTCCTTGCCTCCGGCAAGG 77246
Query 62836 GATAATAATTAATATCTATAATTTTATTGAGATTTC-TGACAATTACTTTGACCACATCC 62894
|||||| |||||| ||||| |||||||| ||||| | || | ||||| || ||
Sbjct 77245 GATAATGATTAATGTCTATGATTTTATTCAGATTACGTGTAACGGTCTTTGTG-ACTTCT 77187
Query 62895 TTCAGTTTGAGAAAATCAAA---TCGCCCATCTATTACAAACATGTTCAATGCAACAGAT 62951
|| || ||| ||| | | | | | | |||||||| ||||| || | ||
Sbjct 77186 TTGAGGCGCTTAAAGTCATACGTTTTCTCGGGTGTGACAAACATATTCAAGGCGATCGAA 77127
Query 62952 GCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGA 63011
|||| || ||||| |||||||||| | || ||||| | || || || || | |
Sbjct 77126 GCCAAGTTGCACACAGCTACCTCATCGGGTGACGAATATTCCACAATTTCGGTACATAAA 77067
Query 63012 TTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 63071
||||||||||| || || || | ||| ||||||||||||||| ||||| ||||| |||
Sbjct 77066 TTACTACACTTAATTGTGCCAACATTCTGTTGATTACTCTTTCGATTACAAGCATCTTTA 77007
Query 63072 TAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 63131
|| | ||| |||| || || || || | || ||||| ||||| ||| | | ||||
Sbjct 77006 TACAACATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAAT-GCTAAACCAAAGACT 76948
Query 63132 C-GAGCCTTTATTATAG-ATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTT 63189
| || |||||| | ||| | | ||||| || || | ||| ||| || ||
Sbjct 76947 TTGTGCTTTTATTTTCTTATTGGCACGTCCTTCCTGTT-CATATTTCAGATATAACTTTT 76889
Query 63190 CGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACC 63249
||||||| || ||||| || | | || | ||||| | | |||||||| | |||||
Sbjct 76888 CGAACTCTTCACCCCATACTTCATGTAAACCGGGACACTTGTGTGGACACATTAGCGACC 76829
Query 63250 ACTCTCCGTCATC--CTTC-ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA- 63305
| ||| ||||| |||| || ||||||||||| |||||||| ||||| | || |||
Sbjct 76828 AGTCT---TCATCGGCTTCTACACGTTTCATAAATAGATCAGGTATCCATA-AGGCATAG 76773
Query 63306 AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 63365
|| | |||||| | | ||| || || || || || || ||||| | || | || |
Sbjct 76772 AACAAATCTCTGGCGCGATGCTCTTCTTTGCCAGTGTTTTTTTTCAATTCCAAAAATTCG 76713
Query 63366 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63425
| |||||||| |||||| ||||||| ||| ||||| | | || || ||||| ||
Sbjct 76712 AAAATATCAGCATGCCATGGTTCCAGGTAGATGGCAAAGGCGCCTGGTCGTTTACCGCCA 76653
Query 63426 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63485
|| ||||| | || | || | ||||| | |||| |||||| || | | ||| |||
Sbjct 76652 CCTTGATCCACATAGCGTGCTATATTATTGAACACTCGCAACATAGGCACCAAACCATTT 76593
Query 63486 GATATACCATTGGTACCGGAGATATAGC--CTCCACTGGCACGAAT---AT-TACTAATT 63539
||| | | ||| ||||| | | || || || | ||||| || || ||| ||
Sbjct 76592 GATGTGCTATTTGTACC-CACA-ATTGCAGTGCCTTTTGCACGTATGCAATGTAC--GTT 76537
Query 63540 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG-TTTTAACGTGTCATA 63598
||||| || || || || ||| || || ||||| ||| | | | | ||| | |
Sbjct 76536 --CAGACCAATACCGCCAGCAGATTTGGAAATCAATGCACATTGATGTGCAGATGTGA-A 76480
Query 63599 GATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63658
|| || || ||| ||| || | |||| | |||||||| || |||| ||| | |
Sbjct 76479 AATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAATTGCGGCTG 76420
Query 63659 AGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 63718
|||| | ||| || | || |||||||| || ||||| | ||| ||||| |
Sbjct 76419 CTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAATAACGTTCGGAAAGCAA 76360
Query 63719 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63778
||||| || || || |||| || || || ||| || || | || ||||||||
Sbjct 76359 GTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGCCATGTATACCGATGGCAACACGCAT 76300
Query 63779 TAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63838
|||||| ||||| |||| |||||||||||| ||| | ||| | ||| ||||| |||
Sbjct 76299 TAACATATGCTGTGGTCGCTCAACAATTTTGCCGTTCAATTTTAGCAAATAGGAACGTTC 76240
Query 63839 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63889
| ||||||||||||||||| || || ||| || || | ||||||||
Sbjct 76239 AAGCGTTTTAAAACCAAAATAATTATAACCAAAATCGCGGGCATAAATAAT 76189
Score = 95.1 bits (104), Expect = 2e-14
Identities = 196/286 (69%), Gaps = 7/286 (2%)
Strand=Plus/Minus
Query 62067 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62126
|| ||||||||||| | ||| ||||| || || || ||||| |||| ||||| |||
Sbjct 85094 GCTGGTTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 85035
Query 62127 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62186
|| ||| || || || ||| | || || || | || || || | || |||||
Sbjct 85034 TGTATAGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 84975
Query 62187 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT-GATCGTCTTTTGTGCAATTTC 62245
||||||||||| || || | |||||||||||||| || ||| || || | ||| ||
Sbjct 84974 TGATCGATGAATGCACCACGATCTGCAGCCATTTTGATCGAT-GTTTTCACGGAAATCTC 84916
Query 62246 CCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGG---TTTGTATTCTGAATGG 62301
||||| ||||| || | |||| | || | | ||| | | | |||| || ||||
Sbjct 84915 CCAAACTGTTTTGTATAGATCGCGT-ATGTGCTGTGGTATGCATTCAATATTTTGTATGG 84857
Query 62302 ATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAA 62347
|||| | | ||||| ||||||| || ||||||| ||| ||
Sbjct 84856 ATCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAA 84811
>seq225
Length=233467
Score = 253 bits (280), Expect = 3e-62
Identities = 487/713 (68%), Gaps = 9/713 (1%)
Strand=Plus/Minus
Query 33407 AATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 33466
|| ||| | ||| || || ||||| ||||| ||| | || |||||||| || ||
Sbjct 26888 AAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGAT 26829
Query 33467 GAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTAT 33526
| || || || | ||| |||| | ||||| || ||||| || || | | ||
Sbjct 26828 TAAATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAAT 26769
Query 33527 AATAAATCTAACGGTT---TCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACA 33583
|| || ||| || || | ||| ||| |||| |||||||| |||||||||||
Sbjct 26768 TATT--TC-AACAATTCGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACA 26712
Query 33584 TGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCC 33643
|||||| || || || || ||||| |||| ||||| ||| || ||||| || | ||
Sbjct 26711 TGCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCC 26652
Query 33644 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGAT 33703
||||||| ||||| || |||||||| || || ||||| || || ||||| ||
Sbjct 26651 TGGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAAT 26592
Query 33704 TCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--CTGTCATGTA-T 33760
||||| || |||||||| ||||| | | || ||| | ||| || | | | |
Sbjct 26591 ACCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTCGAGGAAAT 26532
Query 33761 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33820
||| | |||||||| ||||| ||||| |||||| || ||||| ||||| ||
Sbjct 26531 CCAAGCAAGCGCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCATTGAA 26472
Query 33821 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 33880
| || || ||| || || |||| ||| ||||| || || | |||||||||||
Sbjct 26471 TAAGTAATTCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTC 26412
Query 33881 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 33940
||||| | || || || || || |||||||| ||||| || | ||||| || | ||
Sbjct 26411 AGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTG 26352
Query 33941 CACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAA 34000
||||| || || ||||| ||| |||||||||||| || |||||| || || ||
Sbjct 26351 GACTTCCTGGCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAA 26292
Query 34001 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATT 34060
||| || || || ||| ||||||| | ||| | ||||| ||||||||
Sbjct 26291 AAAGGCTAACACGTGTGAAATAAAATGTCGTTCATTATCAGTTAGACGTGCCCAATCATC 26232
Query 34061 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 34113
||||||||||| | ||| ||||| | |||||||| || ||||| |||||||
Sbjct 26231 CATATCTTTAGAAAGATCTACTTCCCCTACTGTCCAGAACGATGCTTCTGCCT 26179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629565987868800
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