Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq291 500 1e-136
seq225 291 1e-73
>seq291
Length=196152
Score = 500 bits (554), Expect = 1e-136
Identities = 1249/1861 (67%), Gaps = 51/1861 (3%)
Strand=Plus/Minus
Query 64860 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 64919
|| ||||||||||| | ||| ||||| || || || ||||| |||| ||||| |||
Sbjct 78018 GCTGGTTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 77959
Query 64920 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 64979
|| ||| || || || ||| | || || || | || || || | || |||||
Sbjct 77958 TGTATAGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 77899
Query 64980 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT-GATCGTCTTTTGTGGAATTTC 65038
||||||||||| || || | |||||||||||||| || ||| || || | ||| ||
Sbjct 77898 TGATCGATGAATGCACCACGATCTGCAGCCATTTTGATCGAT-GTTTTCACGGAAATCTC 77840
Query 65039 CCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAA-GGTTTG--TATTCTGAATGG 65094
||||| |||||| || | |||| || | | | ||| | || || |||| || ||||
Sbjct 77839 CCAAACAGTTTTGTATAGATCGCGTA-TGTGCTGTGGTATGGATTCAATATTTTGTATGG 77781
Query 65095 ATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT-CTCGGTT 65153
|||| | | | ||||| ||||||| || ||||||| ||| | | |||||||
Sbjct 77780 ATCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAGNACCCAACTCGGTT 77721
Query 65154 AAAACTC-TAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGT 65212
| | | | ||| || || |||| || ||||||||||| || || | || | || ||
Sbjct 77720 AGATCGCGTAACAAG-TGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGT 77662
Query 65213 GTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGA 65272
|||||||| || |||||||| | |||||||| || |||| |||||| || |||||
Sbjct 77661 ATAAATATTGGAAGTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGA 77602
Query 65273 TGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTC--TGATTTTA 65330
||||| ||||| || || | || ||| || | | ||| ||||| | |||||
Sbjct 77601 AGCAGTTGGCATGGGCGCAAGCAGCAAAGAGTTGCGGACACC--ATGTTGCTTTATTTTC 77544
Query 65331 TCTTTTAGA--GGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTT 65388
|| || | ||| ||||||||||||||| | ||| |
Sbjct 77543 TCCTTCAATTCGGT--CCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACT 77486
Query 65389 GTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAG 65448
|||||||||| ||||| || || ||| ||| || || || | || | || ||||
Sbjct 77485 GTAGAATACCCTTACTAACGGGTGAACCTTTATACGTTTCATAGGTGCCATAGTTTTCAG 77426
Query 65449 CTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTA 65508
||| ||| ||||| || || || || || || ||||| |||||||| || | || ||| |
Sbjct 77425 CTAATTCGCAACTGGCTTCCAAGGCGCCATAGTAAATAGTTTCGAATATTTGCTGATTCA 77366
Query 65509 GATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATC 65568
| |||||| || || |||| ||| | ||||| || ||||| || || |
Sbjct 77365 AACGGAATGCTTCTTCACTTTCGTATGGGTAACGCATTAGAATTAAAGCGTCGGCAAAAC 77306
Query 65569 CTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCA--GCTTCTGGAAT 65626
|||| | |||||||| || || | |||||| ||| || |||| || || || |
Sbjct 77305 CTTGTATGCCAATACCAATGGGACGATGTCTGAAATTCGA--TTTCCTTGCCTCCGGCAA 77248
Query 65627 AGGATAATAATTAATATCTATAATTTTATTGAGATTTC-TGACAATTACTTTGACCACAT 65685
||||||| |||||| ||||| |||||||| ||||| | || | ||||| || |
Sbjct 77247 GGGATAATGATTAATGTCTATGATTTTATTCAGATTACGTGTAACGGTCTTTGTG-ACTT 77189
Query 65686 CCTTCAGTTTGAGAAAATCAAA---TCGCTCATCTATTACAAACATGTTCAATGCAACAG 65742
| || || ||| ||| | | ||| | | |||||||| ||||| || | |
Sbjct 77188 CTTTGAGGCGCTTAAAGTCATACGTTTTCTCGGGTGTGACAAACATATTCAAGGCGATCG 77129
Query 65743 ATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAA 65802
| |||| || || || |||||||||| | || ||||| | || || || || |
Sbjct 77128 AAGCCAAGTTGCACACAGCTACCTCATCGGGTGACGAATATTCCACAATTTCGGTACATA 77069
Query 65803 GATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCT 65862
|||||||||||| || || || | ||| ||||||||||||||| ||||| ||||| |
Sbjct 77068 AATTACTACACTTAATTGTGCCAACATTCTGTTGATTACTCTTTCGATTACAAGCATCTT 77009
Query 65863 TATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGA 65922
|||| | ||| |||| || || || || | || ||||| ||||| ||| | | ||
Sbjct 77008 TATACAACATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAAT-GCTAAACCAAAGA 76950
Query 65923 CTC-GAGCCTTTATTATAG-ATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCG 65980
|| | || |||||| | ||| | | || || || || | ||| ||| ||
Sbjct 76949 CTTTGTGCTTTTATTTTCTTATTGGCACGTCCTTCCTGTT-CATATTTCAGATATAACTT 76891
Query 65981 TTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGA 66040
||||||||| || ||||| || | | || || ||||| | | |||||||| | |||
Sbjct 76890 TTCGAACTCTTCACCCCATACTTCATGTAAACCGGGACACTTGTGTGGACACATTAGCGA 76831
Query 66041 CCACTCTCCGTCATC--CTTC-ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 66097
||| ||| ||||| |||| || ||||||||||| |||||||| ||||| | || ||
Sbjct 76830 CCAGTCT---TCATCGGCTTCTACACGTTTCATAAATAGATCAGGTATCCATA-AGGCAT 76775
Query 66098 A-AATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 66156
| || |||||||||| | ||| || || || || || || ||||| | || | ||
Sbjct 76774 AGAACAAATCTCTGGCGCGATGCTCTTCTTTGCCAGTGTTTTTTTTCAATTCCAAAAATT 76715
Query 66157 CCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 66216
| | ||||||| |||||| ||||||| ||| ||||| | | || || ||||| |
Sbjct 76714 CGAAAATATCAGCATGCCATGGTTCCAGGTAGATGGCAAAGGCGCCTGGTCGTTTACCGC 76655
Query 66217 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 66276
| || ||||| | || | || | ||||| | |||| |||||| || | | |||||
Sbjct 76654 CACCTTGATCCACATAGCGTGCTATATTATTGAACACTCGCAACATAGGCACCAAACCAT 76595
Query 66277 TGGATGTACCATTGGT-CCCGGAGATATAGCTTCCACTTGCACGAAT---AT-TACTAAT 66331
| ||||| | ||| || ||| | | || | || ||||||| || || ||| |
Sbjct 76594 TTGATGTGCTATTTGTACCCACAATTGCAG-TGCCTTTTGCACGTATGCAATGTAC--GT 76538
Query 66332 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG-TTTTAACGTATCAT 66390
| ||||| || || || || ||| || || ||||| ||| | | | | | | |
Sbjct 76537 T--CAGACCAATACCGCCAGCAGATTTGGAAATCAATGCACATTGATGTGCAGATGTGA- 76481
Query 66391 AGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 66450
| || || || || ||| |||| |||| | |||||||| || |||| ||| |
Sbjct 76480 AAATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAATTGCGGCT 76421
Query 66451 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTA 66510
| |||| | ||| || | || |||||||| || ||||| | ||| ||||| |
Sbjct 76420 GCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAATAACGTTCGGAAAGCA 76361
Query 66511 GATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCA 66570
||||| || || || |||| || || || ||| || || | || |||||||
Sbjct 76360 AGTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGCCATGTATACCGATGGCAACACGCA 76301
Query 66571 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTT 66630
||||||| ||||| |||| ||||| || ||| ||| | ||| | ||| ||||| ||
Sbjct 76300 TTAACATATGCTGTGGTCGCTCAACAATTTTGCCGTTCAATTTTAGCAAATAGGAACGTT 76241
Query 66631 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 66690
| | ||||||||||||||||| || || ||| || || | |||||||| | ||||
Sbjct 76240 CAAGCGTTTTAAAACCAAAATAATTATAACCAAAATCGCGGGCATAAATAATGGCAGAGT 76181
Query 66691 T 66691
|
Sbjct 76180 T 76180
Score = 98.7 bits (108), Expect = 1e-15
Identities = 197/286 (69%), Gaps = 7/286 (2%)
Strand=Plus/Minus
Query 64860 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 64919
|| ||||||||||| | ||| ||||| || || || ||||| |||| ||||| |||
Sbjct 85094 GCTGGTTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 85035
Query 64920 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 64979
|| ||| || || || ||| | || || || | || || || | || |||||
Sbjct 85034 TGTATAGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 84975
Query 64980 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT-GATCGTCTTTTGTGGAATTTC 65038
||||||||||| || || | |||||||||||||| || ||| || || | ||| ||
Sbjct 84974 TGATCGATGAATGCACCACGATCTGCAGCCATTTTGATCGAT-GTTTTCACGGAAATCTC 84916
Query 65039 CCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGG---TTTGTATTCTGAATGG 65094
||||| ||||| || | |||| | || | | ||| | | | |||| || ||||
Sbjct 84915 CCAAACTGTTTTGTATAGATCGCGT-ATGTGCTGTGGTATGCATTCAATATTTTGTATGG 84857
Query 65095 ATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAA 65140
|||| | | | ||||| ||||||| || ||||||| ||| ||
Sbjct 84856 ATCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAA 84811
>seq225
Length=233467
Score = 291 bits (322), Expect = 1e-73
Identities = 492/710 (69%), Gaps = 3/710 (0%)
Strand=Plus/Minus
Query 35983 AATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 36042
|| ||| | ||| || |||||||| ||||| ||| | || |||||||| || ||
Sbjct 26888 AAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGAT 26829
Query 36043 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 36102
| || || || | ||| |||| | ||||| || ||||| || || || | ||
Sbjct 26828 TAAATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAAT 26769
Query 36103 AATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 36162
|| | | | || | ||| ||| | | |||||||| ||||||||||||||
Sbjct 26768 TATTTCAACAATTCGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGC 26709
Query 36163 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 36222
||| || || || || ||||| |||| ||||| ||| |||||||| || | || ||
Sbjct 26708 GAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGG 26649
Query 36223 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 36282
||||| ||||| || |||||||| || || || ||||| ||| |||||||| ||
Sbjct 26648 CATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATACC 26589
Query 36283 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--ACTGTCATGTA-TCCA 36339
||| || || ||||| ||||| | | || ||| | ||| ||| | | | ||||
Sbjct 26588 TTCAACGGCAGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTCGAGGAAATCCA 26529
Query 36340 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 36399
| |||||||| ||||| ||||| ||||||||||||||||||||| || |
Sbjct 26528 AGCAAGCGCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCATTGAATAA 26469
Query 36400 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 36459
|| || ||| || || |||| |||||||||||| || | ||||||||||| ||
Sbjct 26468 GTAATTCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGA 26409
Query 36460 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 36519
||| | || || || || ||||||||||| ||||| || | ||||| || | || ||
Sbjct 26408 ATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGAC 26349
Query 36520 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 36579
||| || || ||||| ||| |||||||||||| || || ||| || || |||||
Sbjct 26348 TTCCTGGCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAA 26289
Query 36580 CGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGAT 36639
|| || || ||| ||||||| | ||| || ||||| |||||||| ||
Sbjct 26288 GGCTAACACGTGTGAAATAAAATGTCGTTCATTATCAGTTAGACGTGCCCAATCATCCAT 26229
Query 36640 ATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689
||||||||| | ||| ||||| | |||||||| || ||||| |||||||
Sbjct 26228 ATCTTTAGAAAGATCTACTTCCCCTACTGTCCAGAACGATGCTTCTGCCT 26179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657909859966400
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