Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq291 500 1e-136 seq225 291 1e-73 >seq291 Length=196152 Score = 500 bits (554), Expect = 1e-136 Identities = 1249/1861 (67%), Gaps = 51/1861 (3%) Strand=Plus/Minus Query 64860 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 64919 || ||||||||||| | ||| ||||| || || || ||||| |||| ||||| ||| Sbjct 78018 GCTGGTTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 77959 Query 64920 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 64979 || ||| || || || ||| | || || || | || || || | || ||||| Sbjct 77958 TGTATAGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 77899 Query 64980 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT-GATCGTCTTTTGTGGAATTTC 65038 ||||||||||| || || | |||||||||||||| || ||| || || | ||| || Sbjct 77898 TGATCGATGAATGCACCACGATCTGCAGCCATTTTGATCGAT-GTTTTCACGGAAATCTC 77840 Query 65039 CCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAA-GGTTTG--TATTCTGAATGG 65094 ||||| |||||| || | |||| || | | | ||| | || || |||| || |||| Sbjct 77839 CCAAACAGTTTTGTATAGATCGCGTA-TGTGCTGTGGTATGGATTCAATATTTTGTATGG 77781 Query 65095 ATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT-CTCGGTT 65153 |||| | | | ||||| ||||||| || ||||||| ||| | | ||||||| Sbjct 77780 ATCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAGNACCCAACTCGGTT 77721 Query 65154 AAAACTC-TAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGT 65212 | | | | ||| || || |||| || ||||||||||| || || | || | || || Sbjct 77720 AGATCGCGTAACAAG-TGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGT 77662 Query 65213 GTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGA 65272 |||||||| || |||||||| | |||||||| || |||| |||||| || ||||| Sbjct 77661 ATAAATATTGGAAGTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGA 77602 Query 65273 TGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTC--TGATTTTA 65330 ||||| ||||| || || | || ||| || | | ||| ||||| | ||||| Sbjct 77601 AGCAGTTGGCATGGGCGCAAGCAGCAAAGAGTTGCGGACACC--ATGTTGCTTTATTTTC 77544 Query 65331 TCTTTTAGA--GGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTT 65388 || || | ||| ||||||||||||||| | ||| | Sbjct 77543 TCCTTCAATTCGGT--CCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACT 77486 Query 65389 GTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAG 65448 |||||||||| ||||| || || ||| ||| || || || | || | || |||| Sbjct 77485 GTAGAATACCCTTACTAACGGGTGAACCTTTATACGTTTCATAGGTGCCATAGTTTTCAG 77426 Query 65449 CTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTA 65508 ||| ||| ||||| || || || || || || ||||| |||||||| || | || ||| | Sbjct 77425 CTAATTCGCAACTGGCTTCCAAGGCGCCATAGTAAATAGTTTCGAATATTTGCTGATTCA 77366 Query 65509 GATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATC 65568 | |||||| || || |||| ||| | ||||| || ||||| || || | Sbjct 77365 AACGGAATGCTTCTTCACTTTCGTATGGGTAACGCATTAGAATTAAAGCGTCGGCAAAAC 77306 Query 65569 CTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCA--GCTTCTGGAAT 65626 |||| | |||||||| || || | |||||| ||| || |||| || || || | Sbjct 77305 CTTGTATGCCAATACCAATGGGACGATGTCTGAAATTCGA--TTTCCTTGCCTCCGGCAA 77248 Query 65627 AGGATAATAATTAATATCTATAATTTTATTGAGATTTC-TGACAATTACTTTGACCACAT 65685 ||||||| |||||| ||||| |||||||| ||||| | || | ||||| || | Sbjct 77247 GGGATAATGATTAATGTCTATGATTTTATTCAGATTACGTGTAACGGTCTTTGTG-ACTT 77189 Query 65686 CCTTCAGTTTGAGAAAATCAAA---TCGCTCATCTATTACAAACATGTTCAATGCAACAG 65742 | || || ||| ||| | | ||| | | |||||||| ||||| || | | Sbjct 77188 CTTTGAGGCGCTTAAAGTCATACGTTTTCTCGGGTGTGACAAACATATTCAAGGCGATCG 77129 Query 65743 ATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAA 65802 | |||| || || || |||||||||| | || ||||| | || || || || | Sbjct 77128 AAGCCAAGTTGCACACAGCTACCTCATCGGGTGACGAATATTCCACAATTTCGGTACATA 77069 Query 65803 GATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCT 65862 |||||||||||| || || || | ||| ||||||||||||||| ||||| ||||| | Sbjct 77068 AATTACTACACTTAATTGTGCCAACATTCTGTTGATTACTCTTTCGATTACAAGCATCTT 77009 Query 65863 TATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGA 65922 |||| | ||| |||| || || || || | || ||||| ||||| ||| | | || Sbjct 77008 TATACAACATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAAT-GCTAAACCAAAGA 76950 Query 65923 CTC-GAGCCTTTATTATAG-ATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCG 65980 || | || |||||| | ||| | | || || || || | ||| ||| || Sbjct 76949 CTTTGTGCTTTTATTTTCTTATTGGCACGTCCTTCCTGTT-CATATTTCAGATATAACTT 76891 Query 65981 TTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGA 66040 ||||||||| || ||||| || | | || || ||||| | | |||||||| | ||| Sbjct 76890 TTCGAACTCTTCACCCCATACTTCATGTAAACCGGGACACTTGTGTGGACACATTAGCGA 76831 Query 66041 CCACTCTCCGTCATC--CTTC-ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 66097 ||| ||| ||||| |||| || ||||||||||| |||||||| ||||| | || || Sbjct 76830 CCAGTCT---TCATCGGCTTCTACACGTTTCATAAATAGATCAGGTATCCATA-AGGCAT 76775 Query 66098 A-AATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 66156 | || |||||||||| | ||| || || || || || || ||||| | || | || Sbjct 76774 AGAACAAATCTCTGGCGCGATGCTCTTCTTTGCCAGTGTTTTTTTTCAATTCCAAAAATT 76715 Query 66157 CCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 66216 | | ||||||| |||||| ||||||| ||| ||||| | | || || ||||| | Sbjct 76714 CGAAAATATCAGCATGCCATGGTTCCAGGTAGATGGCAAAGGCGCCTGGTCGTTTACCGC 76655 Query 66217 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 66276 | || ||||| | || | || | ||||| | |||| |||||| || | | ||||| Sbjct 76654 CACCTTGATCCACATAGCGTGCTATATTATTGAACACTCGCAACATAGGCACCAAACCAT 76595 Query 66277 TGGATGTACCATTGGT-CCCGGAGATATAGCTTCCACTTGCACGAAT---AT-TACTAAT 66331 | ||||| | ||| || ||| | | || | || ||||||| || || ||| | Sbjct 76594 TTGATGTGCTATTTGTACCCACAATTGCAG-TGCCTTTTGCACGTATGCAATGTAC--GT 76538 Query 66332 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG-TTTTAACGTATCAT 66390 | ||||| || || || || ||| || || ||||| ||| | | | | | | | Sbjct 76537 T--CAGACCAATACCGCCAGCAGATTTGGAAATCAATGCACATTGATGTGCAGATGTGA- 76481 Query 66391 AGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 66450 | || || || || ||| |||| |||| | |||||||| || |||| ||| | Sbjct 76480 AAATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAATTGCGGCT 76421 Query 66451 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTA 66510 | |||| | ||| || | || |||||||| || ||||| | ||| ||||| | Sbjct 76420 GCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAATAACGTTCGGAAAGCA 76361 Query 66511 GATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCA 66570 ||||| || || || |||| || || || ||| || || | || ||||||| Sbjct 76360 AGTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGCCATGTATACCGATGGCAACACGCA 76301 Query 66571 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTT 66630 ||||||| ||||| |||| ||||| || ||| ||| | ||| | ||| ||||| || Sbjct 76300 TTAACATATGCTGTGGTCGCTCAACAATTTTGCCGTTCAATTTTAGCAAATAGGAACGTT 76241 Query 66631 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 66690 | | ||||||||||||||||| || || ||| || || | |||||||| | |||| Sbjct 76240 CAAGCGTTTTAAAACCAAAATAATTATAACCAAAATCGCGGGCATAAATAATGGCAGAGT 76181 Query 66691 T 66691 | Sbjct 76180 T 76180 Score = 98.7 bits (108), Expect = 1e-15 Identities = 197/286 (69%), Gaps = 7/286 (2%) Strand=Plus/Minus Query 64860 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 64919 || ||||||||||| | ||| ||||| || || || ||||| |||| ||||| ||| Sbjct 85094 GCTGGTTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 85035 Query 64920 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 64979 || ||| || || || ||| | || || || | || || || | || ||||| Sbjct 85034 TGTATAGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 84975 Query 64980 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT-GATCGTCTTTTGTGGAATTTC 65038 ||||||||||| || || | |||||||||||||| || ||| || || | ||| || Sbjct 84974 TGATCGATGAATGCACCACGATCTGCAGCCATTTTGATCGAT-GTTTTCACGGAAATCTC 84916 Query 65039 CCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGG---TTTGTATTCTGAATGG 65094 ||||| ||||| || | |||| | || | | ||| | | | |||| || |||| Sbjct 84915 CCAAACTGTTTTGTATAGATCGCGT-ATGTGCTGTGGTATGCATTCAATATTTTGTATGG 84857 Query 65095 ATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAA 65140 |||| | | | ||||| ||||||| || ||||||| ||| || Sbjct 84856 ATCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAA 84811 >seq225 Length=233467 Score = 291 bits (322), Expect = 1e-73 Identities = 492/710 (69%), Gaps = 3/710 (0%) Strand=Plus/Minus Query 35983 AATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 36042 || ||| | ||| || |||||||| ||||| ||| | || |||||||| || || Sbjct 26888 AAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGAT 26829 Query 36043 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 36102 | || || || | ||| |||| | ||||| || ||||| || || || | || Sbjct 26828 TAAATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAAT 26769 Query 36103 AATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 36162 || | | | || | ||| ||| | | |||||||| |||||||||||||| Sbjct 26768 TATTTCAACAATTCGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGC 26709 Query 36163 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 36222 ||| || || || || ||||| |||| ||||| ||| |||||||| || | || || Sbjct 26708 GAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGG 26649 Query 36223 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 36282 ||||| ||||| || |||||||| || || || ||||| ||| |||||||| || Sbjct 26648 CATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATACC 26589 Query 36283 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--ACTGTCATGTA-TCCA 36339 ||| || || ||||| ||||| | | || ||| | ||| ||| | | | |||| Sbjct 26588 TTCAACGGCAGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTCGAGGAAATCCA 26529 Query 36340 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 36399 | |||||||| ||||| ||||| ||||||||||||||||||||| || | Sbjct 26528 AGCAAGCGCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCATTGAATAA 26469 Query 36400 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 36459 || || ||| || || |||| |||||||||||| || | ||||||||||| || Sbjct 26468 GTAATTCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGA 26409 Query 36460 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 36519 ||| | || || || || ||||||||||| ||||| || | ||||| || | || || Sbjct 26408 ATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGAC 26349 Query 36520 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 36579 ||| || || ||||| ||| |||||||||||| || || ||| || || ||||| Sbjct 26348 TTCCTGGCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAA 26289 Query 36580 CGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGAT 36639 || || || ||| ||||||| | ||| || ||||| |||||||| || Sbjct 26288 GGCTAACACGTGTGAAATAAAATGTCGTTCATTATCAGTTAGACGTGCCCAATCATCCAT 26229 Query 36640 ATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689 ||||||||| | ||| ||||| | |||||||| || ||||| ||||||| Sbjct 26228 ATCTTTAGAAAGATCTACTTCCCCTACTGTCCAGAACGATGCTTCTGCCT 26179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657909859966400