Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq291 565 4e-156 seq225 280 2e-70 >seq291 Length=196152 Score = 565 bits (626), Expect = 4e-156 Identities = 1263/1859 (68%), Gaps = 47/1859 (3%) Strand=Plus/Minus Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798 || ||||||||||| | ||| ||||| || || || ||||| |||| ||||||||| Sbjct 78018 GCTGGTTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 77959 Query 78799 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 78858 || ||| || || || ||| | || || || | || || || | || ||||| Sbjct 77958 TGTATAGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 77899 Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT-GATCGTCTTTTGTGGAATTTC 78917 ||||||||||| || || | |||||||||||||| || ||| || || | ||| || Sbjct 77898 TGATCGATGAATGCACCACGATCTGCAGCCATTTTGATCGAT-GTTTTCACGGAAATCTC 77840 Query 78918 CCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAA-GGTTTG--TATTCTGAATGG 78973 ||||| |||||| || | |||| || | | | ||| | || || |||| || |||| Sbjct 77839 CCAAACAGTTTTGTATAGATCGCGTA-TGTGCTGTGGTATGGATTCAATATTTTGTATGG 77781 Query 78974 ATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCT-CTCGGTT 79032 |||| | | | ||||| ||||||| || || |||| ||| | | ||||||| Sbjct 77780 ATCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAGNACCCAACTCGGTT 77721 Query 79033 AAAACTC-TAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGT 79091 | | | | ||| || || |||| || ||||||||||| || || | || | || || Sbjct 77720 AGATCGCGTAACAAG-TGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGT 77662 Query 79092 GTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGA 79151 |||||||| || || ||||| | || ||||| || |||| |||||| || ||||| Sbjct 77661 ATAAATATTGGAAGTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGA 77602 Query 79152 TGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATC 79211 || |||||||| || || | || ||| || | | ||| | | | ||||| || Sbjct 77601 AGCAGTTGGCATGGGCGCAAGCAGCAAAGAGTTGCGGACACCATGTTGCTTTATTTTCTC 77542 Query 79212 TTTTAGAGATTC---CCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTG 79268 || | |||| ||||| ||||||||||| || || ||| | ||||| || Sbjct 77541 CTTCA---ATTCGGTCCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTG 77485 Query 79269 TAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGC 79328 ||||||||| |||||| || ||| ||| | || |||||||| | || | ||||| || Sbjct 77484 TAGAATACCCTTACTAACGGGTGAACCTTTATACGTTTCATAGGTGCCATAGTTTTCAGC 77425 Query 79329 TAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAG 79388 |||||| ||||| || || || || || || ||||| |||||||| || | || ||| | Sbjct 77424 TAATTCGCAACTGGCTTCCAAGGCGCCATAGTAAATAGTTTCGAATATTTGCTGATTCAA 77365 Query 79389 ATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCC 79448 | ||||||| || || |||| ||| | ||||| || ||||| || || || Sbjct 77364 ACGGAATGCTTCTTCACTTTCGTATGGGTAACGCATTAGAATTAAAGCGTCGGCAAAACC 77305 Query 79449 TTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTC--AGCTTCTGGAATA 79506 ||| | |||||||| || || | |||||| ||| | ||||| || || || | Sbjct 77304 TTGTATGCCAATACCAATGGGACGATGTCTGAAATTCG--ATTTCCTTGCCTCCGGCAAG 77247 Query 79507 GGATAATAATTAATATCTATAATTTTATTGAGATTCC---TGACTATTACTTTGACCACA 79563 ||||||| |||||| ||||| |||||||| ||||| | | || | ||||| || Sbjct 77246 GGATAATGATTAATGTCTATGATTTTATTCAGATTACGTGTAACGGT--CTTTG-TGACT 77190 Query 79564 TCCTTTAGTTTGAGAAAATCAAA--TCGTC-CATCTATTACAAACATGTTCAACGCGACA 79620 || || || ||| ||| | | || | | | |||||||| ||||| |||| Sbjct 77189 TCTTTGAGGCGCTTAAAGTCATACGTTTTCTCGGGTGTGACAAACATATTCAAGGCGATC 77130 Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680 || |||| || || || |||||||||| | || ||||| | ||||| || || Sbjct 77129 GAAGCCAAGTTGCACACAGCTACCTCATCGGGTGACGAATATTCCACAATTTCGGTACAT 77070 Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740 | |||||||||||||| || || | ||| ||||||||||||||| ||||| ||||| Sbjct 77069 AAATTACTACACTTAATTGTGCCAACATTCTGTTGATTACTCTTTCGATTACAAGCATCT 77010 Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 79800 ||||| | ||| | || || || || || | || ||||| ||||| ||| | | | Sbjct 77009 TTATACAACATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAAT-GCTAAACCAAAG 76951 Query 79801 AC-TCGAGCCTTTATTAT-AGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATC 79858 || | | || |||||| | | | | | || || || ||| |||| |||||| Sbjct 76950 ACTTTGTGCTTTTATTTTCTTATTGGCACGTCCTTCCT-GTTCATATTTCAGATATAACT 76892 Query 79859 GTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACG 79918 ||||||||| || ||||| || || | ||| || ||||| | || |||||||| | || Sbjct 76891 TTTCGAACTCTTCACCCCATACTTCATGTAAACCGGGACACTTGTGTGGACACATTAGCG 76832 Query 79919 ACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA- 79977 |||| ||| |||| | | ||| ||||||||||| |||||||| ||||| | || ||| Sbjct 76831 ACCAGTCTTCATCGGCTTCTACACGTTTCATAAATAGATCAGGTATCCATA-AGGCATAG 76773 Query 79978 AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 80037 || | |||||||| | |||||| || || || || || ||||| | || | || | Sbjct 76772 AACAAATCTCTGGCGCGATGCTCTTCTTTGCCAGTGTTTTTTTTCAATTCCAAAAATTCG 76713 Query 80038 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCT 80097 | |||||||| |||||| ||||||| ||| ||||| | | || |||||||| || Sbjct 76712 AAAATATCAGCATGCCATGGTTCCAGGTAGATGGCAAAGGCGCCTGGTCGTTTACCGCCA 76653 Query 80098 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 80157 || ||||| | || | || | ||||| | |||| |||||| || | | |||||| Sbjct 76652 CCTTGATCCACATAGCGTGCTATATTATTGAACACTCGCAACATAGGCACCAAACCATTT 76593 Query 80158 GATGTACCATTGGT-CCCGGAGATATAGCTTCCACTGGCACGAAT---AT-TACTAATTG 80212 ||||| | ||| || ||| | | || | || | ||||| || || ||| || Sbjct 76592 GATGTGCTATTTGTACCCACAATTGCAG-TGCCTTTTGCACGTATGCAATGTAC--GTT- 76537 Query 80213 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG-TTTTAACGTATCATAG 80271 ||||| || || || || ||| || || ||||| ||| | | | | | | | | Sbjct 76536 -CAGACCAATACCGCCAGCAGATTTGGAAATCAATGCACATTGATGTGCAGATGTGA-AA 76479 Query 80272 ATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 80331 || || || ||| ||| || | |||| | |||||||| || |||| ||| | | Sbjct 76478 ATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAATTGCGGCTGC 76419 Query 80332 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 80391 |||| | ||| || | || |||||||| || ||||| | ||| || || | Sbjct 76418 TTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAATAACGTTCGGAAAGCAAG 76359 Query 80392 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATT 80451 ||||| || || || |||| || || || ||| || || | || ||||||||| Sbjct 76358 TTGTAAGTTTCGATTGCTGCATCGATGTCTTCGCCATGTATACCGATGGCAACACGCATT 76299 Query 80452 AACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCC 80511 ||||| ||||| |||| ||||| || ||| || | ||| | ||| || || ||| Sbjct 76298 AACATATGCTGTGGTCGCTCAACAATTTTGCCGTTCAATTTTAGCAAATAGGAACGTTCA 76239 Query 80512 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 80570 | ||||||||||||||||| || || ||| || || | |||||||| | ||||| Sbjct 76238 AGCGTTTTAAAACCAAAATAATTATAACCAAAATCGCGGGCATAAATAATGGCAGAGTT 76180 Score = 98.7 bits (108), Expect = 1e-15 Identities = 197/286 (69%), Gaps = 7/286 (2%) Strand=Plus/Minus Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798 || ||||||||||| | ||| ||||| || || || ||||| |||| ||||||||| Sbjct 85094 GCTGGTTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 85035 Query 78799 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 78858 || ||| || || || ||| | || || || | || || || | || ||||| Sbjct 85034 TGTATAGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 84975 Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT-GATCGTCTTTTGTGGAATTTC 78917 ||||||||||| || || | |||||||||||||| || ||| || || | ||| || Sbjct 84974 TGATCGATGAATGCACCACGATCTGCAGCCATTTTGATCGAT-GTTTTCACGGAAATCTC 84916 Query 78918 CCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGG---TTTGTATTCTGAATGG 78973 ||||| ||||| || | |||| | || | | ||| | | | |||| || |||| Sbjct 84915 CCAAACTGTTTTGTATAGATCGCGT-ATGTGCTGTGGTATGCATTCAATATTTTGTATGG 84857 Query 78974 ATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAA 79019 |||| | | | ||||| ||||||| || || |||| ||| || Sbjct 84856 ATCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAA 84811 >seq225 Length=233467 Score = 280 bits (310), Expect = 2e-70 Identities = 493/713 (69%), Gaps = 9/713 (1%) Strand=Plus/Minus Query 49785 AATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 49844 || ||| | ||| || |||||||| ||||| ||| | || |||||||| || || Sbjct 26888 AAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGAT 26829 Query 49845 AAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTAT 49904 | || || || | ||| |||| | ||||| || ||||| || || || | || Sbjct 26828 TAAATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAAT 26769 Query 49905 AATAGATCTAACGGTT---TCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACA 49961 || || ||| || || | ||| ||| || | |||||||| ||||||||||| Sbjct 26768 TATT--TC-AACAATTCGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACA 26712 Query 49962 TGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCC 50021 |||||| || || || || ||||| |||| ||||||||| |||||||| || | || Sbjct 26711 TGCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCC 26652 Query 50022 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGAT 50081 ||||||| ||||| || |||||||| || || || ||||| ||| ||||| || Sbjct 26651 TGGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAAT 26592 Query 50082 TCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG--CTGTCATGTA-T 50138 ||||| || || ||||| |||| | | || ||| | |||| || | | | | Sbjct 26591 ACCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTCGAGGAAAT 26532 Query 50139 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 50198 ||| | |||||||| ||||| ||||| |||||| || ||||| ||||| || Sbjct 26531 CCAAGCAAGCGCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCATTGAA 26472 Query 50199 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 50258 | || || ||| || || |||| ||| ||||| || || | ||||||||||| Sbjct 26471 TAAGTAATTCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTC 26412 Query 50259 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 50318 ||||| | || || || || || |||||||| ||||| || | ||||| || | || Sbjct 26411 AGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTG 26352 Query 50319 CACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAA 50378 ||||| || || |||||| ||| |||||||||||| || || ||| || || || Sbjct 26351 GACTTCCTGGCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAA 26292 Query 50379 AAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATT 50438 ||| || || || ||| ||||||||| ||| || ||||| |||||||| Sbjct 26291 AAAGGCTAACACGTGTGAAATAAAATGTCGTTCATTATCAGTTAGACGTGCCCAATCATC 26232 Query 50439 GATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 50491 ||||||||||| | ||||||||| | |||||||| || ||||| ||||||| Sbjct 26231 CATATCTTTAGAAAGATCTACTTCCCCTACTGTCCAGAACGATGCTTCTGCCT 26179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717981851614400