Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq291 520 1e-142
seq225 268 1e-66
>seq291
Length=196152
Score = 520 bits (576), Expect = 1e-142
Identities = 1238/1843 (67%), Gaps = 43/1843 (2%)
Strand=Plus/Minus
Query 70827 TTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCAT 70886
||||||||| | ||| |||||||| || || ||||| |||| ||||| ||||| ||
Sbjct 78013 TTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTAT 77954
Query 70887 ACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATC 70946
| || || || |||| | || || || | ||| || || | ||||||||| |||||
Sbjct 77953 AGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTCTGATC 77894
Query 70947 GATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT-GATCGTCTTTTGTGGAATTTCCCAAA 71005
|||||| || || | |||||||||||||| || ||| || || | ||| |||||||
Sbjct 77893 GATGAATGCACCACGATCTGCAGCCATTTTGATCGAT-GTTTTCACGGAAATCTCCCAAA 77835
Query 71006 TAGTTTTATAAAC-TCGCTTAATATCTTCTGGAA-GGTTTG--TATTCTGAATGGATCCA 71061
|||||| || | |||| || | | | ||| | || || |||| || ||||||||
Sbjct 77834 CAGTTTTGTATAGATCGCGTA-TGTGCTGTGGTATGGATTCAATATTTTGTATGGATCCG 77776
Query 71062 CCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCT-CTCGGTTAAAAC 71120
| | | ||||| |||| || || || |||| ||| | | |||||||| | |
Sbjct 77775 CGACTGGTTATAATATTATTCTTCATATCATCATCCCACAGNACCCAACTCGGTTAGATC 77716
Query 71121 TC-TAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAA 71179
| ||| || ||| |||| || ||||||||||| || || | || | ||| || ||||
Sbjct 77715 GCGTAACAAG-TGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGTATAAA 77657
Query 71180 TATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAG 71239
|||| || |||||||| | ||||||||| || |||| |||||| || ||||| ||||
Sbjct 77656 TATTGGAAGTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGAAGCAG 77597
Query 71240 TCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTA 71299
| ||||| || || | || | | || | | ||||||| ||||| || || |
Sbjct 77596 TTGGCATGGGCGCAAGCAGCAAAGAGTTGCGGACACCATGTTGCTTTATTTTCTCCTTCA 77537
Query 71300 GAGATTC---CCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNA 71356
|||| ||||||||||||||| | |||| |
Sbjct 77536 ---ATTCGGTCCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTGTAGAA 77480
Query 71357 TGCCGTTACTAGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTT 71416
| || |||||| || ||| ||| ||| || || || | || | ||||| |||| ||
Sbjct 77479 TACCCTTACTAACGGGTGAACCTTTATACGTTTCATAGGTGCCATAGTTTTCAGCTAATT 77420
Query 71417 CACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTT 71476
| ||||| || || || || ||||| ||||| |||||||| || | || ||| | |
Sbjct 77419 CGCAACTGGCTTCCAAGGCGCCATAGTAAATAGTTTCGAATATTTGCTGATTCAAACGGA 77360
Query 71477 GTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 71536
|||||| || || |||| ||| | ||||| || ||||| || || ||||| |
Sbjct 77359 ATGCTTCTTCACTTTCGTATGGGTAACGCATTAGAATTAAAGCGTCGGCAAAACCTTGTA 77300
Query 71537 CGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCA--GCTTCTGGAATAGGATA 71594
||||||||| || || | ||||| ||| || |||| || || || | |||||
Sbjct 77299 TGCCAATACCAATGGGACGATGTCTGAAATTCGA--TTTCCTTGCCTCCGGCAAGGGATA 77242
Query 71595 ATAATTAATATCTATAATTTTATTGAGATTTC---TGACTATTACTTTGACCACATCCTT 71651
|| |||||| ||||| |||||||| ||||| | | || | ||||| || || ||
Sbjct 77241 ATGATTAATGTCTATGATTTTATTCAGATTACGTGTAACGGT--CTTTGTG-ACTTCTTT 77185
Query 71652 TAGTTTGAGAAAATCAAA---TCTCCCATCTATTACAAACACGTTCAAGGCAACAGATGC 71708
|| ||| ||| | | || | | | ||||||| |||||||| | || ||
Sbjct 77184 GAGGCGCTTAAAGTCATACGTTTTCTCGGGTGTGACAAACATATTCAAGGCGATCGAAGC 77125
Query 71709 CAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATT 71768
|| || || || |||||||||| | | ||||| | |||||| || || | |||
Sbjct 77124 CAAGTTGCACACAGCTACCTCATCGGGTGACGAATATTCCACAATTTCGGTACATAAATT 77065
Query 71769 ACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATA 71828
||||||||| || || || | ||| ||||||||||||||| ||||| ||||| |||||
Sbjct 77064 ACTACACTTAATTGTGCCAACATTCTGTTGATTACTCTTTCGATTACAAGCATCTTTATA 77005
Query 71829 AAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC- 71887
| || | || || || || || | || ||||| ||||| ||| | | ||||
Sbjct 77004 CAACATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAAT-GCTAAACCAAAGACTTT 76946
Query 71888 GAGCCTTTATTATATTCTTGTATC-TCTTTTCTCTTTCGTATTGTGTATATAATCGTTCG 71946
| || |||||| | || ||| | || || || || | |||| |||||| ||||
Sbjct 76945 GTGCTTTTATTTTCTTATTGGCACGTCCTTCCTGTT-CATATTTCAGATATAACTTTTCG 76887
Query 71947 AACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCAC 72006
||||| || ||||| | | | ||| || ||||| | | |||||||| | |||||
Sbjct 76886 AACTCTTCACCCCATACTTCATGTAAACCGGGACACTTGTGTGGACACATTAGCGACCAG 76827
Query 72007 TCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAG 72065
||| |||| | | ||| ||||||||||| |||||||| ||||| | || ||| || |
Sbjct 76826 TCTTCATCGGCTTCTACACGTTTCATAAATAGATCAGGTATCCATA-AGGCATAGAACAA 76768
Query 72066 ATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 72125
|||||||| | |||||| || || || || || ||||| | || | || | | |||
Sbjct 76767 ATCTCTGGCGCGATGCTCTTCTTTGCCAGTGTTTTTTTTCAATTCCAAAAATTCGAAAAT 76708
Query 72126 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTG 72185
||||| |||||| ||||||| ||| ||||| | | || || ||||| || || ||
Sbjct 76707 ATCAGCATGCCATGGTTCCAGGTAGATGGCAAAGGCGCCTGGTCGTTTACCGCCACCTTG 76648
Query 72186 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGC 72245
||| | || | || | ||||| | |||| |||||| || | | |||||| ||||
Sbjct 76647 ATCCACATAGCGTGCTATATTATTGAACACTCGCAACATAGGCACCAAACCATTTGATGT 76588
Query 72246 ACCATTGGT-CCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACC 72302
| ||| || ||| | | || | || | ||||| || | || || | |||||
Sbjct 76587 GCTATTTGTACCCACAATTGCAG-TGCCTTTTGCACGTATGCAATG-TACGT-TCAGACC 76531
Query 72303 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG-TTTTAACGTATCATAGATGCCCT 72361
|| || || || ||| || || ||||| ||| | | | | | | | | || || |
Sbjct 76530 AATACCGCCAGCAGATTTGGAAATCAATGCACATTGATGTGCAGATGTGA-AAATACCAT 76472
Query 72362 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 72421
| || ||| |||| |||| | |||||||| || |||| ||| | | ||||
Sbjct 76471 CAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAATTGCGGCTGCTTAGTGG 76412
Query 72422 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG 72481
| ||| || | || |||||||| || ||||| | ||| || || | ||||| |
Sbjct 76411 CAGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAATAACGTTCGGAAAGCAAGTTGTAAG 76352
Query 72482 TCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATAT 72541
| || || |||| || || || |||||| || | || ||||||||||||||||
Sbjct 76351 TTTCGATTGCTGCATCGATGTCTTCGCCATGTATACCGATGGCAACACGCATTAACATAT 76292
Query 72542 GCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 72601
|||| |||| ||||| || ||| || | ||| | ||| ||||| ||| | ||||
Sbjct 76291 GCTGTGGTCGCTCAACAATTTTGCCGTTCAATTTTAGCAAATAGGAACGTTCAAGCGTTT 76232
Query 72602 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 72644
||||||||||||| || || ||| || || | ||||||||
Sbjct 76231 TAAAACCAAAATAATTATAACCAAAATCGCGGGCATAAATAAT 76189
Score = 107 bits (118), Expect = 3e-18
Identities = 196/281 (70%), Gaps = 7/281 (2%)
Strand=Plus/Minus
Query 70827 TTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCAT 70886
||||||||| | ||| |||||||| || || ||||| |||| ||||| ||||| ||
Sbjct 85089 TTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTAT 85030
Query 70887 ACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATC 70946
| || || || |||| | || || || | ||| || || | ||||||||| |||||
Sbjct 85029 AGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTCTGATC 84970
Query 70947 GATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT-GATCGTCTTTTGTGGAATTTCCCAAA 71005
|||||| || || | |||||||||||||| || ||| || || | ||| |||||||
Sbjct 84969 GATGAATGCACCACGATCTGCAGCCATTTTGATCGAT-GTTTTCACGGAAATCTCCCAAA 84911
Query 71006 TAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGG---TTTGTATTCTGAATGGATCCA 71061
||||| || | |||| | || | | ||| | | | |||| || ||||||||
Sbjct 84910 CTGTTTTGTATAGATCGCGT-ATGTGCTGTGGTATGCATTCAATATTTTGTATGGATCCG 84852
Query 71062 CCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAA 71102
| | | ||||| |||| || || || |||| ||| ||
Sbjct 84851 CGACTGGTTATAATATTATTCTTCATATCATCATCCCACAA 84811
>seq225
Length=233467
Score = 268 bits (296), Expect = 1e-66
Identities = 393/554 (71%), Gaps = 3/554 (1%)
Strand=Plus/Minus
Query 42046 TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAA 42105
|||||||| ||||||||||||||||| || || || || |||||||||| |||||
Sbjct 26732 TAAATGTTGGAACATCAAACATGCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAG 26673
Query 42106 TTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGC 42165
||| |||||||| || | || ||||||| ||||| || |||||||| || || || ||
Sbjct 26672 TTCATTGGAAAATGTCAAGCCTGGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGC 26613
Query 42166 AAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA 42225
||| ||| ||||| || ||||| || || ||||| ||||| | | || ||| |
Sbjct 26612 AAAACTGCCACTGAAGAAAATACCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAA 26553
Query 42226 ACCGGC--ACTGTCATGTA-TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 42282
||| ||| | | | |||| | |||||||| ||||| ||||| |||
Sbjct 26552 GTTGGCCGACTTCGAGGAAATCCAAGCAAGCGCCCAATCTGCCTTACGCTTTACGGCAGG 26493
Query 42283 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATC 42342
||| || ||||| ||||| || | || || ||| || || |||| |||||||||
Sbjct 26492 CATTGTCTCTATAGCATTGAATAAGTAATTCCTTTGTTTCGAGTCCTTAATATATGTATC 26433
Query 42343 GATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 42402
|| || | ||||||||||| ||||| | || || || || || |||||||| |||||
Sbjct 26432 AATTAATATGCTATACATTTCAGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAA 26373
Query 42403 ACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCAC 42462
|| | ||||| || || || ||||| || || |||||| ||| |||||| |||||
Sbjct 26372 GCAACGTGCCTCTGTCACTTGGACTTCCTGGCAGAAGCGTTCAACTACATTTTCATTCAC 26313
Query 42463 TATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGG 42522
|| || ||| || || ||||| || || || ||| ||||||| | ||| |
Sbjct 26312 AATACCATCAGATGCGGCGAAAAAGGCTAACACGTGTGAAATAAAATGTCGTTCATTATC 26253
Query 42523 TGTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAA 42582
|||| |||||||| ||||||||||| | ||||||||| |||| ||||| ||
Sbjct 26252 AGTTAGACGTGCCCAATCATCCATATCTTTAGAAAGATCTACTTCCCCTACTGTCCAGAA 26193
Query 42583 TGATGCTTCTGCCT 42596
|||||||||||||
Sbjct 26192 CGATGCTTCTGCCT 26179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 670871079889600
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