Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_004775.1 Length=39671 Score E Sequences producing significant alignments: (Bits) Value seq2983 219 1e-52 >seq2983 Length=44036 Score = 219 bits (242), Expect = 1e-52 Identities = 258/344 (75%), Gaps = 4/344 (1%) Strand=Plus/Plus Query 34172 CACTTCTTCGCCGGAATTGGCGTCTGGTCTCATTCCCTGCGCCTCGCCGGATGGCCAGAT 34231 ||| | |||||||| || ||||||||||| | |||||||| |||||||||| || Sbjct 42788 CACCTATTCGCCGGGATCGGCGTCTGGTCCTACGCCCTGCGCGCTGCCGGATGGCGTGAC 42847 Query 34232 GATAAAACAGTCTGGACCGGCTCCTGCCCGTGCCAGCCTTTCAGC-GCGGCAGGCAAAGG 34290 || | ||||||||| ||||||||||||||||||| |||||| | || |||||||| Sbjct 42848 GACCGCCCCGTCTGGACCTGCTCCTGCCCGTGCCAGCCGTTCAGCAGTAGC-GGCAAAGG 42906 Query 34291 AGATGGGTTTGCTGACGAGCGGCACCTTTGGCCACACTTCTTCCACCTCATCAGCGAGCG 34350 || || || | ||| ||| ||||| ||||| ||| | ||||||| ||||| Sbjct 42907 GGACGGATTCGACGACCCGCGACACCTCTGGCCCCACGCAAAACGCCTCATCGAAGAGCG 42966 Query 34351 CAGACCTCAGCATGTCTTTGGCGAACAGGTTGCAGCAGGTAACGCAAACACATGGTTCGA 34410 | | ||| | | ||||||||||||||| |||||| |||||| |||||||||| Sbjct 42967 CCGCCCTTTCGTTATTTTTGGCGAACAGGTTAGCGCAGGTGGCGCAAATGCATGGTTCGA 43026 Query 34411 CCTTGTACAAGCAGACCTGGAAGGAGTGGGATACACCTTCGGGCT-TGTGCCGTTCACGT 34469 |||||||||| | ||||||||| || |||| ||| |||| ||||| ||| ||||| || Sbjct 43027 CCTTGTACAAACTGACCTGGAAAGAATGGGCTACGCCTTTGGGCTATGT-CCGTTTCCGG 43085 Query 34470 CAGCGGGCATCGGTGCGCCGCACATCAGAGAGCGAGCTTACTGG 34513 | ||| || |||| || |||||| ||||| |||| |||||| Sbjct 43086 CTGCGAGCGTCGGCGCTCCGCACCAAAGAGACAGAGCATACTGG 43129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126777466514160