Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_004775.1
Length=39671
Score E
Sequences producing significant alignments: (Bits) Value
seq2983 219 1e-52
>seq2983
Length=44036
Score = 219 bits (242), Expect = 1e-52
Identities = 258/344 (75%), Gaps = 4/344 (1%)
Strand=Plus/Plus
Query 34172 CACTTCTTCGCCGGAATTGGCGTCTGGTCTCATTCCCTGCGCCTCGCCGGATGGCCAGAT 34231
||| | |||||||| || ||||||||||| | |||||||| |||||||||| ||
Sbjct 42788 CACCTATTCGCCGGGATCGGCGTCTGGTCCTACGCCCTGCGCGCTGCCGGATGGCGTGAC 42847
Query 34232 GATAAAACAGTCTGGACCGGCTCCTGCCCGTGCCAGCCTTTCAGC-GCGGCAGGCAAAGG 34290
|| | ||||||||| ||||||||||||||||||| |||||| | || ||||||||
Sbjct 42848 GACCGCCCCGTCTGGACCTGCTCCTGCCCGTGCCAGCCGTTCAGCAGTAGC-GGCAAAGG 42906
Query 34291 AGATGGGTTTGCTGACGAGCGGCACCTTTGGCCACACTTCTTCCACCTCATCAGCGAGCG 34350
|| || || | ||| ||| ||||| ||||| ||| | ||||||| |||||
Sbjct 42907 GGACGGATTCGACGACCCGCGACACCTCTGGCCCCACGCAAAACGCCTCATCGAAGAGCG 42966
Query 34351 CAGACCTCAGCATGTCTTTGGCGAACAGGTTGCAGCAGGTAACGCAAACACATGGTTCGA 34410
| | ||| | | ||||||||||||||| |||||| |||||| ||||||||||
Sbjct 42967 CCGCCCTTTCGTTATTTTTGGCGAACAGGTTAGCGCAGGTGGCGCAAATGCATGGTTCGA 43026
Query 34411 CCTTGTACAAGCAGACCTGGAAGGAGTGGGATACACCTTCGGGCT-TGTGCCGTTCACGT 34469
|||||||||| | ||||||||| || |||| ||| |||| ||||| ||| ||||| ||
Sbjct 43027 CCTTGTACAAACTGACCTGGAAAGAATGGGCTACGCCTTTGGGCTATGT-CCGTTTCCGG 43085
Query 34470 CAGCGGGCATCGGTGCGCCGCACATCAGAGAGCGAGCTTACTGG 34513
| ||| || |||| || |||||| ||||| |||| ||||||
Sbjct 43086 CTGCGAGCGTCGGCGCTCCGCACCAAAGAGACAGAGCATACTGG 43129
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 126777466514160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |