Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq749 116 2e-21 seq2732 105 4e-18 >seq749 Length=113903 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 |||||||| | ||| ||||| || || || |||||||| |||| | || || ||| ||| Sbjct 958 ACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTCTTCC 1017 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 | ||| || || ||| ||||||||||| || || | ||| || |||||||| || | Sbjct 1018 AGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTGTCTTGA 1077 Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340 ||| ||| || ||| ||| || ||| |||| ||| |||||||| || || || Sbjct 1078 ATCTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGTCTTG 1137 Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 || || | || || ||||| |||||||| || Sbjct 1138 CCAGTCAAGGTCTTCACGAAGATTTGCATTTT 1169 Score = 113 bits (124), Expect = 3e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||| ||||| || | || || || ||||| || |||||||| ||||| | || | Sbjct 496 CGCAATACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCGGACAAGGTACGTCCG 555 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || ||||||||||| || || ||||||||||| || || | || || || || || Sbjct 556 TCTTCCAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATACCCTCCTTG 615 Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334 || ||| ||| || ||| ||| || ||| |||| ||| |||||||| || Sbjct 616 TCCTGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAAGGTTCAACCTCCAGAGTAATT 675 Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||||| ||||| | |||||| ||||| |||||||| Sbjct 676 GTTTTACCCGTCAAAGTTTTAACGAAGATTTGCAT 710 Score = 102 bits (112), Expect = 5e-17 Identities = 154/218 (71%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||| ||||| || | || ||||||||||| || |||||||| ||||| | || | Sbjct 40 CGCAATACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGACAAGGTACGTCCG 99 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT- 33273 || |||||||| || || || || ||||||||||| || | ||| |||||||| || Sbjct 100 TCCTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCCTTA 159 Query 33274 --TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || | | | ||| || || | | ||| || || |||| ||| |||| || Sbjct 160 TCTTGGATCTTAGCC---TTAACGTTCTCAATGGTATCTGAAGGTTCAACNTCCAAGGTA 216 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| || || || || || ||||| |||||||| Sbjct 217 ATGGTTTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 254 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| || | ||| || | || ||||| | || || || ||||| ||||| || || || Sbjct 711 ACCACCACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTTTGAATATTATAGTCGGA 770 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || || || || ||||| || || ||| || || |||||||| || || | ||| Sbjct 771 CAGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGG 830 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || ||||| || || ||| ||| || | | ||| || ||| || | ||| Sbjct 831 GATTCCTTCCTTATCTTGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAAC 890 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 |||| ||| || ||||||||||| | |||||| |||||||| |||||| Sbjct 891 CTCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCATG 939 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||| ||||| || | || ||||| || || || ||||| || ||||| || || | Sbjct 268 CGCAATACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAATGTGCGTCCG 327 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT- 33273 || ||||||||||| || || || |||||||| || || | || || || || || Sbjct 328 TCCTCCAATTGCTTACCGGCGAAGATCAAACGTTGTTGATCTGGAGGAATACCCTCCTTA 387 Query 33274 --TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || | | | ||| ||||| | | ||| || || || | ||| |||| ||| Sbjct 388 TCTTGGATCTTGGCC---TTTACGTTCTCAATGGTATCTGAAGGCTCAACTTCCAAAGTG 444 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| || || || || |||||||| |||||||| Sbjct 445 ATGGTTTTGCCGGTGAGGGTCTTTACGAAGATTTGCAT 482 >seq2732 Length=47336 Score = 105 bits (116), Expect = 4e-18 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || ||||| | || | || ||||||||||| |||||||| || ||||| || |||| | Sbjct 1606 CCACCTCTAAGACGAAGTACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCC 1665 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 || || | || |||||||||||||| ||| |||| ||| || || || | || Sbjct 1666 AATGTGCGACCATCTTCCAATTGCTTTCCGGCAAAAATTAGACGCTGTTGATCAGGCGGA 1725 Query 33263 ATGCCTTCTTTTTCGCTAA---TCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319 || ||||| || || || | ||| || || || ||| || || || | | Sbjct 1726 ATTCCTTCCTTATCTTGAATTTTGGCC---TTAACATGTTCAATAGTATCCGAAGGCTCA 1782 Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || ||||| || || || |||||||| ||||||||||| |||||||| Sbjct 1783 ACCTCAAGAGTGATGGTCTTACCCGTAAGGGTTTTTACGAATATTTGCAT 1832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318653432140080