Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq749 104 2e-17
seq609 84.2 2e-11
>seq749
Length=113903
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972
|| |||||||| ||| || |||||||||||||| ||| | | || |||| |||
Sbjct 730 ACTAAATGTAGAGTGGATTCCTTTTGAATATTATAGTCGGACAGTGTGCGTCCATCCTCC 789
Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032
|| ||||| || || || ||||| ||||| || || | || | ||||| |||||| |
Sbjct 790 AACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTTGA 849
Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092
||||| |||||| | ||| ||||| | ||||| || || | || || |||||
Sbjct 850 ATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTT 909
Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCATG 44122
|| || ||||| || || || || ||||||
Sbjct 910 CCCGTCAAAGTTTTGACGAAAATCTGCATG 939
Score = 95.1 bits (104), Expect = 9e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969
|| ||||| || || || ||||||||| || || |||||| || ||| | ||
Sbjct 43 AATACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGACAAGGTACGTCCGTCC 102
Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029
||||||||||| || || || ||||| |||||||| || | || | ||||| ||||||
Sbjct 103 TCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCCTTATCT 162
Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089
|| || || || | ||| ||||||| || || || || | ||||| |||
Sbjct 163 TGGATCTTAGCCTTAACGTTCTCAATGGTATCTGAAGGTTCAACNTCCAAGGTAATGGTT 222
Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| || || | |||||||| || ||||||||
Sbjct 223 TTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 254
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969
|| ||||| || || || || ||||| || || |||||| || ||| | ||
Sbjct 499 AATACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCGGACAAGGTACGTCCGTCT 558
Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029
|||||||| || || || || || || ||||| || || |||| | ||| || || ||
Sbjct 559 TCCAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATACCCTCCTTGTCC 618
Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089
||||||| ||| || | ||| ||||| | || || || || | |||||||||
Sbjct 619 TGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAAGGTTCAACCTCCAGAGTAATTGTT 678
Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||||| || ||||| || || || ||||||||
Sbjct 679 TTACCCGTCAAAGTTTTAACGAAGATTTGCAT 710
>seq609
Length=128410
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972
|||||||| || || ||| ||||| || || || ||| || ||| |||| |||
Sbjct 92952 ACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGTACGACCATCTTCC 92893
Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032
||||||||||| || || ||||| || || || || | || | ||| ||||| |||
Sbjct 92892 AATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTGTCTTGG 92833
Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092
||||| |||||| | | | || || | ||||| || || | || || || |||
Sbjct 92832 ATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATGGTCTTA 92773
Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| ||||| || || || || || |||||
Sbjct 92772 CCAGTTAAGGTTTTGACGAAAATCTGCAT 92744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354639409690080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |