Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq225 187 2e-42 >seq225 Length=233467 Score = 187 bits (206), Expect = 2e-42 Identities = 496/746 (66%), Gaps = 15/746 (2%) Strand=Plus/Minus Query 12948 AATAGTATTTTTTACAC-CCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTAC 13006 |||| || |||| ||| |||| || | | ||| | ||||| ||||| || || || Sbjct 26917 AATATTACTTTTCCCACTCCTAGCTCGACAAGCAAACGATCAGCCACAAATTCGATATAA 26858 Query 13007 TGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAG 13066 | ||||| | || ||||| || ||||| || || |||| ||| || ||||| || Sbjct 26857 TCGGACATTAGTTTGCAATTCATACCGATTAAATTCACCGGCAAAGCGTCAGTTAAGAAT 26798 Query 13067 tttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGA 13126 | | || || | ||| ||||| || ||| || ||| || || || | | | Sbjct 26797 TCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCAACAATT-CGCTCATTACTTG-GTT 26740 Query 13127 TTTGA--TAGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTAC 13184 |||| || ||| | ||||||| |||||| || ||||| || | ||| ||||||| Sbjct 26739 TTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCACAATGAAGTCCCTCATCTCGTG 26680 Query 13185 TTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATA 13244 ||||| || || |||||||| | || ||||| | || ||||| |||| ||| || | Sbjct 26679 AAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAACCACGTTTCTTAAGCCAGAAGA 26620 Query 13245 TAGCAGCAAACGAACCC--GaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCT 13302 | | |||||| || ||| |||||| |||||||| || ||||| || || | | Sbjct 26619 TCGAAGCAAAACTGCCACTGAAGAAAATA--CCTTCAACGGCAGCAAATGCAATTACACG 26562 Query 13303 TTCACCATACGTA--CTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGT 13360 ||||||| | | | | || | ||||| ||||| | ||| || | Sbjct 26561 TTCACCAAAGTTGGCCGACTTCGAGGAA--ATCCAAGCAAGCGCCCAATCTGCCTTACGC 26504 Query 13361 TTAACG-CAGTTCATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAA 13419 || ||| ||| ||| | ||||| || || ||||| ||||| ||| || ||| Sbjct 26503 TTTACGGCAGG-CATTGTCTCTATAGCATTGAATAAGTAATTCCTTTGTTTCGAGTCCTT 26445 Query 13420 AATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTG 13479 |||||| ||||| || |||| |||||||||||| ||||| | ||| |||||||| ||||| Sbjct 26444 AATATATGTATCAATTAATATGCTATACATTTCAGAATGCACATTCTCCATCGCAATTTG 26385 Query 13480 GAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAA 13539 || ||||| || || | ||||||| || || ||||| | | || | ||| ||| Sbjct 26384 AAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCTGGCAGAAGCGTTCAACTAC 26325 Query 13540 GTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttt 13599 ||||| || || || || ||| || || ||||| || | | ||| |||||| | Sbjct 26324 ATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGCTAACACGTGTGAAATAAAATG 26265 Query 13600 tttttCGTTTTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTC 13659 | ||| || || | | | |||||| | |||||| || | |||||| ||| | Sbjct 26264 TCGTTCATTATCAGTTAGACGTGCCCAATCATCCATATCTTTAGAAAGATCTACTTCCCC 26205 Query 13660 AACGGTCCAAAAAGAAGCAACAGCCT 13685 || ||||| || || || | |||| Sbjct 26204 TACTGTCCAGAACGATGCTTCTGCCT 26179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430814526967920