Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_005887.1 Length=42415 Score E Sequences producing significant alignments: (Bits) Value seq2983 212 2e-50 >seq2983 Length=44036 Score = 212 bits (234), Expect = 2e-50 Identities = 245/321 (76%), Gaps = 12/321 (4%) Strand=Plus/Minus Query 32072 GTGCGGGGCACCGACGCCCGCAGACGGAAACGGGACACA-CCCATAGGCGTAGTCCAGCG 32130 |||||| || ||||||| ||||| ||||||||| ||| | |||| |||||||| ||| Sbjct 43108 GTGCGGAGCGCCGACGCTCGCAGCCGGAAACGG-ACATAGCCCAAAGGCGTAGCCCATTC 43050 Query 32131 CTTCCACGTCAGTTTGTACAAGGTCGATCCAGTCGT---CGACAGCGCTGCTCGCAACCT 32187 ||||| |||||||||||||||||||| ||| | | || || | ||| ||||| Sbjct 43049 TTTCCAGGTCAGTTTGTACAAGGTCGAACCATGCATTTGCGCCACCTGCGCT---AACCT 42993 Query 32188 GTTCTCCAAACACCACTGCAGGTCGGCGCTCAGCGATGAGCCAGTGCCAGTGCGGCCAGA 32247 |||| ||||| | || ||| |||||||| ||||||| | | ||| ||||||| Sbjct 42992 GTTCGCCAAAAATAACGAAAGGGCGGCGCTCTTCGATGAGGCGTTTTGCGTGGGGCCAGA 42933 Query 32248 GGTGCCGCTCGTCATCAAACCCGCCACCTTTGCCTGCCGCGGA-GAAAGGTTGGCACGGG 32306 |||| ||| ||| || || ||| | |||||||| || | | ||| || ||||||||| Sbjct 42932 GGTGTCGCGGGTCGTCGAATCCGTCCCCTTTGCC-GCTACTGCTGAACGGCTGGCACGGG 42874 Query 32307 CATGATCCGGTCCACACGGGGCGATCGTCGGGCCAGCCGGC-GCGCCGCAGTGCGTAGGA 32365 || || | |||||| |||||||| ||||| |||| ||||| |||| |||| |||||||| Sbjct 42873 CAGGAGCAGGTCCAGACGGGGCGGTCGTCACGCCATCCGGCAGCGC-GCAGGGCGTAGGA 42815 Query 32366 CCACACGCCGATGCCGGCGAA 32386 ||| |||||||| |||||||| Sbjct 42814 CCAGACGCCGATCCCGGCGAA 42794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135554933981040