Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq157 201 1e-46 seq931 93.3 5e-14 >seq157 Length=290505 Score = 201 bits (222), Expect = 1e-46 Identities = 314/443 (71%), Gaps = 16/443 (4%) Strand=Plus/Minus Query 6801 TCGAGTTAATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAG 6860 ||| ||||| |||||||||| |||| ||||||| ||| | ||| ||||| || | Sbjct 145071 TCGCGTTAACTGTTCTTTTAATGCTTCAATATGATTATTATAGACATGTGCATCGCCCAA 145012 Query 6861 CGTATGAATAAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAA 6920 || || | ||| || |||||| | |||| | |||||||| | ||| || | || Sbjct 145011 AGTGTGGACAAAATCCCCTGGTCGGAGATCAGTAATATGAGCAATCATATAGGTAAGCAA 144952 Query 6921 TGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACA 6980 || || || || | |||||| |||||||| ||||||||||| || | ||| || | Sbjct 144951 AGCGTACGAGGCAATATTAAATGGTACACCCAATCCCATATCGGCACTGCGTTGGTATAA 144892 Query 6981 TTGACAAGATAAAATATTGTCTAT----AGCATAAAATTGACACAATAC-ATGACATGGA 7035 ||||||||||| ||| || || | || ||||||| ||| || |||||| || Sbjct 144891 TTGACAAGATA----ATTCTCCATTGGCAACAAAAAATTG-TGCAAGACAATGACAAGGT 144837 Query 7036 GGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCA 7095 |||| | | ||| ||||| ||||||||||||| ||||| |||||| | |||| Sbjct 144836 GGTAGAGCCATTTGAGGGATATCGACAGGATTCCAAGCAGACATTATAATACGCCGATCA 144777 Query 7096 TTTGGATTTGTTTTTAATTTTGTTATAATTATT---TGTAATTGATCTATACCCTGACCT 7152 |||||| |||||| | ||| ||| ||||| | || | |||||||||||||| | || Sbjct 144776 TTTGGA-TTGTTTCTGATTGTGT--CAATTACTTGCTGAAGTTGATCTATACCCTCATCT 144720 Query 7153 TCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAA 7212 | ||| | | || ||| | || || || |||||||| | ||| ||||| |||||| Sbjct 144719 TTGTAACTGTCCTTGCAGTTTCTGTACTTGGCCCCAAAATGACGCCACTGAAAACCATAA 144660 Query 7213 ATAGGACCTAAATCACCTTCTTC 7235 | || |||| ||||||||| || Sbjct 144659 ACTGGGCCTAGATCACCTTCCTC 144637 >seq931 Length=99288 Score = 93.3 bits (102), Expect = 5e-14 Identities = 145/202 (72%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 164503 GGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTA 164562 ||||| ||||| | ||||| || | || |||| || |||||| ||||||||| | Sbjct 51602 GGCTGCAAACACGTTAAAGGCATACTCTTGTATGGCCCACCTGGTACCGGTAAAACGCTG 51661 Query 164563 ATGGCTCGATGCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATGGT 164619 ||||| || |||| || | |||||| ||||| ||| ||||||||||||||| Sbjct 51662 ATGGCACGTCAAATTGG-CACTATGTTAAATGCGCGCGAGCCG--AAAATTGTTAATGGT 51718 Query 164620 CCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTC-A 164678 || || | ||| ||||||| ||||| || ||||| || ||| || | || |||| Sbjct 51719 CCACAAATTTTGGACAAATACGTAGGCGAATCAGAGGCCAAT-ATACGACGTCTTTTCGC 51777 Query 164679 GGAGGCTGAAGAAGAACAAAAG 164700 |||||||| ||||| ||||| Sbjct 51778 CGAGGCTGAGGAAGAGGAAAAG 51799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595633949136000