Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq3043 136 2e-27 >seq3043 Length=43363 Score = 136 bits (150), Expect = 2e-27 Identities = 192/270 (71%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 3875 GGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAA 3934 ||||| ||||| | ||||| || || ||||| || |||||||||||||||||||| ||| Sbjct 36818 GGTGTTCATTTCGTTATGGCAGATGGAGGGTTTTCAGTTGAGGGTCAAGAAAATATCCAA 36759 Query 3935 GAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATACGA 3994 ||||| | || || | | ||||||||||||||||| || ||||| | ||| | ||| Sbjct 36758 GAAATTCTTTCTAAGCAACTTTATTTGTGTCAATGTTTGATGGCATTAAAAATCCTTCGA 36699 Query 3995 ATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTA 4054 | || || | || |||||| || ||| |||| || || |||||| || | Sbjct 36698 GTAAACGGCAGTTTTCTTTGCAAATTATTTGATTTATTCACGCCATTTAGTATAGGACTG 36639 Query 4055 GTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATCGCGA 4114 | | ||| ||||||| || |||| ||| || | ||| || ||||| || || Sbjct 36638 ATATTTTTAATGTATAAATGTTTTGATCAGATATCTATATTGAAACCTAATAGTAGTAGA 36579 Query 4115 CCGGCCAATTCTGAAAGATATTTGGTGTGT 4144 ||||| ||||| || ||||||| || ||| Sbjct 36578 CCGGCGAATTCAGAGCGATATTTAGTTTGT 36549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276445878915880