Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq601 127 1e-24
seq508 122 5e-23
seq4634 118 6e-22
seq5883 114 7e-21
seq19776 113 2e-20
seq17829 113 2e-20
seq14360 113 2e-20
>seq601
Length=129108
Score = 127 bits (140), Expect = 1e-24
Identities = 89/102 (87%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 11428 GAAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTC 11487
||| | | ||| || ||||| | |||||||||||||| |||||||||| ||||||||
Sbjct 29317 GAATTTTCGAAAAAAAAAAAATTAAAATTGGCCCATGAGGGGATCGAACCCGCGACCTTC 29258
Query 11488 GCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||||||||||||||| ||||||||||||||||||||
Sbjct 29257 GCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 29216
Score = 122 bits (134), Expect = 5e-23
Identities = 78/86 (91%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
||||| | || ||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 33691 AAAAATTTAAGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 33632
Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529
||||| ||||||||||||||||||||
Sbjct 33631 GCTCTAACCAACTGAGCTAATGGGCC 33606
>seq508
Length=141276
Score = 122 bits (134), Expect = 5e-23
Identities = 86/99 (87%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 11431 ATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCG 11490
||| | ||| | ||||||| || |||||||||| |||||||||| |||||||||||
Sbjct 37227 ATAAAAAATATAAAAAAAATTAATGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCG 37286
Query 11491 TTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||||||||||||| ||||||||||||||||||||
Sbjct 37287 TTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 37325
>seq4634
Length=29185
Score = 118 bits (130), Expect = 6e-22
Identities = 89/103 (86%), Gaps = 2/103 (2%)
Strand=Plus/Plus
Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488
|||| || | |||| ||||| || |||||||||| |||||||||| |||||||||
Sbjct 22560 AAAT-TAAAGTTAA-AAAAATTCCTTGTGGCCCATGAGGGGATCGAACCCGCGACCTTCG 22617
Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531
|||||||||||||||||||| ||||||||||||||||||||||
Sbjct 22618 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGT 22660
>seq5883
Length=22155
Score = 114 bits (126), Expect = 7e-21
Identities = 79/90 (88%), Gaps = 4/90 (4%)
Strand=Plus/Minus
Query 11444 AAAAAATCAAATT----GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499
||||| || |||| ||||||||| |||||||||| ||||||||||||||||||||
Sbjct 10759 AAAAAGTCGAATTATGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCA 10700
Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||| ||||||||||||||||||||
Sbjct 10699 CGACGCTCTAACCAACTGAGCTAATGGGCC 10670
Score = 113 bits (124), Expect = 2e-20
Identities = 69/74 (93%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 15946 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 15887
Query 11516 TGAGCTAATGGGCC 11529
||||||||||||||
Sbjct 15886 TGAGCTAATGGGCC 15873
Score = 113 bits (124), Expect = 2e-20
Identities = 69/74 (93%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 16503 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 16444
Query 11516 TGAGCTAATGGGCC 11529
||||||||||||||
Sbjct 16443 TGAGCTAATGGGCC 16430
Score = 109 bits (120), Expect = 3e-19
Identities = 67/72 (93%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 11458 GCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTG 11517
|||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 20825 GCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTG 20766
Query 11518 AGCTAATGGGCC 11529
||||||||||||
Sbjct 20765 AGCTAATGGGCC 20754
>seq19776
Length=1421
Score = 113 bits (124), Expect = 2e-20
Identities = 69/74 (93%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 433 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 492
Query 11516 TGAGCTAATGGGCC 11529
||||||||||||||
Sbjct 493 TGAGCTAATGGGCC 506
>seq17829
Length=1530
Score = 113 bits (124), Expect = 2e-20
Identities = 69/74 (93%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1205 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1264
Query 11516 TGAGCTAATGGGCC 11529
||||||||||||||
Sbjct 1265 TGAGCTAATGGGCC 1278
>seq14360
Length=1858
Score = 113 bits (124), Expect = 2e-20
Identities = 69/74 (93%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 148 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 207
Query 11516 TGAGCTAATGGGCC 11529
||||||||||||||
Sbjct 208 TGAGCTAATGGGCC 221
Lambda K H
0.638 0.410 0.920
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261389345908960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |