Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq5149 176 7e-40 seq18253 107 3e-19 >seq5149 Length=25893 Score = 176 bits (194), Expect = 7e-40 Identities = 199/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||||||||| | | | | || ||||||||||| |||||||| ||||| ||||| Sbjct 16715 GCTAAGCGTCATCGTAAAGTTTTACGTGATAACATCCAGGGAATCACTAAGCCTGCTATT 16656 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||| ||||||||||||| || || || ||| | ||||| ||| | |||||||| | | Sbjct 16655 CGGCGTTTGGCTCGTCGTGGAGGTGTAAAACGTATATCTGGTTTGATATATGAAGAAACT 16596 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || || || | || | ||| ||||||| |||||| | |||||| || Sbjct 16595 CGTGGAGTCTTAAAAGTATTTTTAGAGAATGTTATCCGTGATGCAGTTACCTATACTGAA 16536 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||||||| | ||||| || || | |||||| | || ||||| ||||| | ||||| Sbjct 16535 CACGCTAAAAGGAAGACAGTTACAGCAATGGATGTTGTATATGCTTTGAAGAGACAAGGA 16476 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | ||||| || || ||||| Sbjct 16475 CGTACCTTGTATGGATTCGGCGGTTAA 16449 >seq18253 Length=1501 Score = 107 bits (118), Expect = 3e-19 Identities = 92/114 (81%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || |||||||||||||| |||||||| || || || || ||| ||||||||||||| Sbjct 475 CTACGTGATAACATCCAAGGTATCACCAAACCGGCCATTCGCCGTTTGGCTCGTCGTGGC 416 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 || || || ||| | ||||||||| | |||||||| | |||| ||| |||||| Sbjct 415 GGTGTAAAACGTATTTCTGGATTGATTTATGAAGAAACGCGTGGTGTATTGAAG 362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79045978748280