Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq225 176 5e-39
>seq225
Length=233467
Score = 176 bits (194), Expect = 5e-39
Identities = 447/678 (66%), Gaps = 12/678 (2%)
Strand=Plus/Minus
Query 21310 ATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTTAC 21369
||| || |||||||| ||||| | |||||| || |||||||||||||| || || ||
Sbjct 26879 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAAATTCAC 26820
Query 21370 AGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATATTTAT 21429
|| | ||| | || || || | || || || |||||| |||||| | |
Sbjct 26819 CGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCAAC 26760
Query 21430 TATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATCACA 21489
|| | |||| || | | ||| |||| |||||||||||||| || |||||
Sbjct 26759 AATTCGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCACA 26700
Query 21490 ATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCC 21549
||| | || ||||| | |||| |||||| |||||||| || || |||||||| ||
Sbjct 26699 ATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAACC 26640
Query 21550 TCTCTTTTTTAACCAAAATATTGACGCAAA--TGCTCCTGAAAAGAAAATGCCCTCAACG 21607
| || || | ||| || || || ||||| ||| ||||| |||||| || ||||||
Sbjct 26639 ACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAA--GAAAATACCTTCAACG 26582
Query 21608 GCAGCAAATGCAACTAATCGTTCACC---GTATGTAGATTCTTTATCCAATATCCATTTT 21664
||||||||||||| || |||||||| || | || ||| || |||||
Sbjct 26581 GCAGCAAATGCAATTACACGTTCACCAAAGTTGGCCGA--CTTCGAGGAA-ATCCAAGCA 26525
Query 21665 TCTGCCCATTTTGCCTT-TTCTTTAATACAATCAATTGTATCAATAGCTTTTAAAAGATG 21723
||||| | |||||| ||||| || | ||||| || ||||| || || | |
Sbjct 26524 AGCGCCCAATCTGCCTTACGCTTTACGGCAGGC-ATTGTCTCTATAGCATTGAATAAGTA 26466
Query 21724 AtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGAATG 21783
||| ||| | || | || |||||||||||||||||
Sbjct 26465 ATTCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATG 26406
Query 21784 TATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAACCTC 21843
| ||| || ||||| || |||||||| || || || | |||||||| ||| || ||
Sbjct 26405 CACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTC 26346
Query 21844 GGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGC 21903
| || |||| | | | |||||||| || || |||||| ||||| ||||| ||
Sbjct 26345 CTGGCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGC 26286
Query 21904 CAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTTCCAATCTAATAAATC 21963
|| | | | ||||||| |||||| ||||| |||| | |||||| | |||
Sbjct 26285 TAACACGTGTGAAATAAAATGTCGTTCATTATCAGTTAGACGTGCCCAATCATCCATATC 26226
Query 21964 TTTTGATAAATCTACTTC 21981
||| || | |||||||||
Sbjct 26225 TTTAGAAAGATCTACTTC 26208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531688305630400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |