Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq291 508 7e-139 seq225 262 5e-65 >seq291 Length=196152 Score = 508 bits (562), Expect = 7e-139 Identities = 1252/1862 (67%), Gaps = 53/1862 (3%) Strand=Plus/Minus Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62075 || ||||||||||| | ||| ||||| || || || ||||| |||| ||||| ||| Sbjct 78018 GCTGGTTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 77959 Query 62076 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62135 || ||| || || || ||| | || || || | || || || | || ||||| Sbjct 77958 TGTATAGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 77899 Query 62136 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT-GATCGTCTTTTGTGGAATTTC 62194 ||||||||||| || || | |||||||||||||| || ||| || || | ||| || Sbjct 77898 TGATCGATGAATGCACCACGATCTGCAGCCATTTTGATCGAT-GTTTTCACGGAAATCTC 77840 Query 62195 CCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAA-GGTTTG--TATTCTGAATGG 62250 ||||| |||||| || | |||| || | | | ||| | || || |||| || |||| Sbjct 77839 CCAAACAGTTTTGTATAGATCGCGTA-TGTGCTGTGGTATGGATTCAATATTTTGTATGG 77781 Query 62251 ATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT-CTCGGTT 62309 |||| | | | ||||| ||||||| || ||||||| ||| | | ||||||| Sbjct 77780 ATCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAGNACCCAACTCGGTT 77721 Query 62310 AAAACTC-TAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGT 62368 | | | | ||| || || |||| || ||||||||||| || || | || | || || Sbjct 77720 AGATCGCGTAACAAG-TGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGT 77662 Query 62369 GTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGA 62428 |||||||| || |||||||| | |||||||| || |||| |||||| || ||||| Sbjct 77661 ATAAATATTGGAAGTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGA 77602 Query 62429 TGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTC--TGATTTTA 62486 ||||| ||||| || || | || ||| || | | ||| ||||| | ||||| Sbjct 77601 AGCAGTTGGCATGGGCGCAAGCAGCAAAGAGTTGCGGACACC--ATGTTGCTTTATTTTC 77544 Query 62487 TCTTTTAGA--GGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTT 62544 || || | ||| ||||||||||||||| | ||| | Sbjct 77543 TCCTTCAATTCGGT--CCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACT 77486 Query 62545 GTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAG 62604 |||||||||| ||||| || || ||| ||| || || || | || | || |||| Sbjct 77485 GTAGAATACCCTTACTAACGGGTGAACCTTTATACGTTTCATAGGTGCCATAGTTTTCAG 77426 Query 62605 CTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTA 62664 ||| ||| ||||| || || || || || || ||||| |||||||| || | || ||| | Sbjct 77425 CTAATTCGCAACTGGCTTCCAAGGCGCCATAGTAAATAGTTTCGAATATTTGCTGATTCA 77366 Query 62665 GATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATC 62724 | |||||| || || |||| ||| | ||||| || ||||| || || | Sbjct 77365 AACGGAATGCTTCTTCACTTTCGTATGGGTAACGCATTAGAATTAAAGCGTCGGCAAAAC 77306 Query 62725 CTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCA--GCTTCTGGAAT 62782 |||| | |||||||| || || | |||||| ||| || |||| || || || | Sbjct 77305 CTTGTATGCCAATACCAATGGGACGATGTCTGAAATTCGA--TTTCCTTGCCTCCGGCAA 77248 Query 62783 AGGATAATAATTAATATCTATAATTTTATTGAGATTTC-TGACAATTACTTTGACCACAT 62841 ||||||| |||||| ||||| |||||||| ||||| | || | ||||| || | Sbjct 77247 GGGATAATGATTAATGTCTATGATTTTATTCAGATTACGTGTAACGGTCTTTGTG-ACTT 77189 Query 62842 CCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTATTACAAACATGTTCAAGGCAACAG 62898 | || || ||| ||| | | | | | | |||||||| |||||||| | | Sbjct 77188 CTTTGAGGCGCTTAAAGTCATACGTTTTCTCGGGTGTGACAAACATATTCAAGGCGATCG 77129 Query 62899 ATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAA 62958 | |||| || || || |||||||||| | || ||||| | || || || || | Sbjct 77128 AAGCCAAGTTGCACACAGCTACCTCATCGGGTGACGAATATTCCACAATTTCGGTACATA 77069 Query 62959 GATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCT 63018 |||||||||||| || || || | ||| ||||||||||||||| ||||| ||||| | Sbjct 77068 AATTACTACACTTAATTGTGCCAACATTCTGTTGATTACTCTTTCGATTACAAGCATCTT 77009 Query 63019 TATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGA 63078 |||| | ||| |||| || || || || | || ||||| ||||| ||| | | || Sbjct 77008 TATACAACATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAAT-GCTAAACCAAAGA 76950 Query 63079 CTC-GAGCCTTTATTATAG-ATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCG 63136 || | || |||||| | ||| | | ||||| || || | ||| ||| || Sbjct 76949 CTTTGTGCTTTTATTTTCTTATTGGCACGTCCTTCCTGTT-CATATTTCAGATATAACTT 76891 Query 63137 TTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGA 63196 ||||||||| || ||||| || | | || || ||||| | | |||||||| | ||| Sbjct 76890 TTCGAACTCTTCACCCCATACTTCATGTAAACCGGGACACTTGTGTGGACACATTAGCGA 76831 Query 63197 CCACTCTCCGTCATC--CTTC-ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 63253 ||| ||| ||||| |||| || ||||||||||| |||||||| ||||| | || || Sbjct 76830 CCAGTCT---TCATCGGCTTCTACACGTTTCATAAATAGATCAGGTATCCATA-AGGCAT 76775 Query 63254 A-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 63312 | || | |||||||| | ||| || || || || || || ||||| | || | || Sbjct 76774 AGAACAAATCTCTGGCGCGATGCTCTTCTTTGCCAGTGTTTTTTTTCAATTCCAAAAATT 76715 Query 63313 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 63372 | | |||||||| |||||| ||||||| ||| ||||| | | || || ||||| | Sbjct 76714 CGAAAATATCAGCATGCCATGGTTCCAGGTAGATGGCAAAGGCGCCTGGTCGTTTACCGC 76655 Query 63373 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGT 63432 | || ||||| | || | || | ||||| | |||| |||||| || | | ||| | Sbjct 76654 CACCTTGATCCACATAGCGTGCTATATTATTGAACACTCGCAACATAGGCACCAAACCAT 76595 Query 63433 TTGATATACCATTGGTACCGGAGATATAGC--TTCCACTGGCACGAAT---AT-TACTAA 63486 ||||| | | ||| ||||| | | || || | || | ||||| || || ||| Sbjct 76594 TTGATGTGCTATTTGTACC-CACA-ATTGCAGTGCCTTTTGCACGTATGCAATGTAC--G 76539 Query 63487 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG-TTTTAACGTGTCA 63545 || ||||| || || || || ||| || || ||||| ||| | | | | ||| | Sbjct 76538 TT--CAGACCAATACCGCCAGCAGATTTGGAAATCAATGCACATTGATGTGCAGATGTGA 76481 Query 63546 TAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA 63605 | ||||| || ||| ||| || | |||| | |||||||| || |||| ||| | Sbjct 76480 -AAATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAATTGCGGC 76422 Query 63606 CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGT 63665 | |||| | ||| || | || |||||||| || ||||| | ||| ||||| Sbjct 76421 TGCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAATAACGTTCGGAAAGC 76362 Query 63666 AGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGC 63725 | ||||| || || || |||| || || || ||| || || | || |||||| Sbjct 76361 AAGTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGCCATGTATACCGATGGCAACACGC 76302 Query 63726 ATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTT 63785 |||||||| ||||| |||| ||||| || ||| ||| | ||| | ||| ||||| | Sbjct 76301 ATTAACATATGCTGTGGTCGCTCAACAATTTTGCCGTTCAATTTTAGCAAATAGGAACGT 76242 Query 63786 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAG 63845 || | ||||||||||||||||| || || ||| || || | |||||||| | ||| Sbjct 76241 TCAAGCGTTTTAAAACCAAAATAATTATAACCAAAATCGCGGGCATAAATAATGGCAGAG 76182 Query 63846 TT 63847 || Sbjct 76181 TT 76180 Score = 98.7 bits (108), Expect = 1e-15 Identities = 197/286 (69%), Gaps = 7/286 (2%) Strand=Plus/Minus Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62075 || ||||||||||| | ||| ||||| || || || ||||| |||| ||||| ||| Sbjct 85094 GCTGGTTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 85035 Query 62076 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62135 || ||| || || || ||| | || || || | || || || | || ||||| Sbjct 85034 TGTATAGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 84975 Query 62136 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT-GATCGTCTTTTGTGGAATTTC 62194 ||||||||||| || || | |||||||||||||| || ||| || || | ||| || Sbjct 84974 TGATCGATGAATGCACCACGATCTGCAGCCATTTTGATCGAT-GTTTTCACGGAAATCTC 84916 Query 62195 CCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGG---TTTGTATTCTGAATGG 62250 ||||| ||||| || | |||| | || | | ||| | | | |||| || |||| Sbjct 84915 CCAAACTGTTTTGTATAGATCGCGT-ATGTGCTGTGGTATGCATTCAATATTTTGTATGG 84857 Query 62251 ATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAA 62296 |||| | | | ||||| ||||||| || ||||||| ||| || Sbjct 84856 ATCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAA 84811 >seq225 Length=233467 Score = 262 bits (290), Expect = 5e-65 Identities = 489/713 (69%), Gaps = 9/713 (1%) Strand=Plus/Minus Query 33129 AATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 33188 || ||| | ||| || || ||||| ||||| ||| | || |||||||| || || Sbjct 26888 AAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGAT 26829 Query 33189 AAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTAT 33248 | || || || | ||| |||| | ||||| || ||||| || || || | || Sbjct 26828 TAAATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAAT 26769 Query 33249 AATAGATCTAACGGTT---TCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACA 33305 || || ||| || || | ||| ||| || | |||||||| ||||||||||| Sbjct 26768 TATT--TC-AACAATTCGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACA 26712 Query 33306 TGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCC 33365 |||||| || || || || ||||| |||| ||||||||| |||||||| || | || Sbjct 26711 TGCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCC 26652 Query 33366 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGAT 33425 ||||||| ||||| || |||||||| || || ||||| || ||| ||||| || Sbjct 26651 TGGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAAT 26592 Query 33426 TCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--CTGTCATGTA-T 33482 ||||| || |||||||| ||||| | | || ||| | ||| || | | | | Sbjct 26591 ACCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTCGAGGAAAT 26532 Query 33483 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33542 ||| | |||||||| ||||| ||||| |||||| || ||||| ||||| || Sbjct 26531 CCAAGCAAGCGCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCATTGAA 26472 Query 33543 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 33602 | || || ||| || || |||| ||| ||||| || || | ||||||||||| Sbjct 26471 TAAGTAATTCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTC 26412 Query 33603 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 33662 ||||| | || || || || || |||||||| ||||| || | ||||| || | || Sbjct 26411 AGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTG 26352 Query 33663 TACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAA 33722 ||||| || || ||||| | | |||||||||||| || || ||| || || || Sbjct 26351 GACTTCCTGGCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAA 26292 Query 33723 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATT 33782 ||| || || || ||| ||||||| | ||| | ||||| |||||||| Sbjct 26291 AAAGGCTAACACGTGTGAAATAAAATGTCGTTCATTATCAGTTAGACGTGCCCAATCATC 26232 Query 33783 GATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33835 ||||||||||| | ||||||||| | |||||||| || ||||| ||||||| Sbjct 26231 CATATCTTTAGAAAGATCTACTTCCCCTACTGTCCAGAACGATGCTTCTGCCT 26179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622698332593600