Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq291 248 2e-60 seq157 167 6e-36 seq225 102 2e-16 >seq291 Length=196152 Score = 248 bits (274), Expect = 2e-60 Identities = 582/870 (67%), Gaps = 14/870 (2%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 |||||||| || || ||||||||||||||||||||||| || ||||| ||| || || Sbjct 76273 ATTGTTGAGCGACCACAGCATATGTTAATGCGTGTTGCCATCGGTATACATGGCGAAGAC 76332 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACG 363561 | ||||| || || ||||| || || | || | ||| || || || || | Sbjct 76333 ATCGATGCAGCAATCGAAACTTACAACTTGCTTTCCGAACGTTATTTTACACATGCTTCT 76392 Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621 ||||| | | | ||||| ||| | || || |||| || |||||||| || | Sbjct 76393 CCAACGCTTTTCGCTGCTGCCACTAAGCAGCCGCAATTGTCATCATGCTTTCTACTGACC 76452 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGA--ATTGTGCTCTTATTT 363679 ||| |||||||||||| || ||||| ||| ||| || | | | ||||| | |||| Sbjct 76453 ATGGTGGACGATTCCATTGATGGTAT-TTTCACAT-CTGCACATCAATGTGCATTGATTT 76510 Query 363680 CCAAGAATGCAGGCGGAATTGGTGTATCGATCC-ACAATG--TTCGTGCACAGAACAGTT 363736 |||| ||| ||||| |||||| | || | ||| || | |||||| | || | Sbjct 76511 CCAAATCTGCTGGCGGTATTGGTCT---GAACGTACATTGCATACGTGCAAAAGGCACTG 76567 Query 363737 ACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 ||| || ||| | || ||||| |||| || ||| | || ||||| | | Sbjct 76568 CAATTGTGGGTACAAATAGCACATCAAATGGTTTGGTGCCTATGTTGCGAGTGTTCAATA 76627 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856 ||| || | || || || || ||||| || || || ||| || ||||| || || | Sbjct 76628 ATATAGCACGCTATGTGGATCAAGGTGGCGGTAAACGACCAGGCGCCTTTGCCATCTACC 76687 Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAG 363916 | || || ||||| |||||||| || ||| | || | |||||||| || |||| Sbjct 76688 TGGAACCATGGCATGCTGATATTTTCGAATTTTTGGAATTGAAAAAAAACACTGGCAAAG 76747 Query 363917 AGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGC 363976 | || || || | ||| |||||||||| | ||| | |||| | |||||||| | Sbjct 76748 AAGAGCATCGCGCCAGAGATTTGTTCTATGCCTTATGGATACCTGATCTATTTATGAAAC 76807 Query 363977 GCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCG 364036 | || || || | | | | ||||| || | || |||||| | ||||| ||| | | Sbjct 76808 GTGTAGAAGCCGATGAAGACTGGTCGCTAATGTGTCCACACAAGTGTCCCGGTTTACATG 76867 Query 364037 ATGTATGGGGTGACGACTATG--TTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC 364094 | ||||||||||| || | | | | ||| |||| |||||| ||| ||| || Sbjct 76868 AAGTATGGGGTGAAGAGTTCGAAAAGTTATATCTGAAA--TATGAACAGGAAGGACGTGC 76925 Query 364095 TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGAC 364154 ||||| ||| ||||| | || |||||| ||| || || ||||| | ||||| Sbjct 76926 CAATAAGAAAATAAAAGCACAAAGTCTTTGGTTTAGCATTATTGAATCGCAAGTGGAGAC 76985 Query 364155 AGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCT 364214 || ||||| || |||||||| |||||| | || || || ||| || || ||| | | Sbjct 76986 CGGCACACCATACATGTTGTATAAAGATGCTTGTAATCGAAAGAGTAATCAACAGAATGT 77045 Query 364215 TGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGA 364274 ||| |||||| || || || |||||||||| ||| | ||||| | | ||||| || Sbjct 77046 TGGCACAATTAAGTGTAGTAATTTATGTACCGAAATTGTGGAATATTCGTCACCCGATGA 77105 Query 364275 GACTGCCGTATGTAACCTTGCGTCGATCGC 364304 | || || || ||| | || |||||||| Sbjct 77106 GGTAGCTGTGTGCAACTTGGCTTCGATCGC 77135 Score = 147 bits (162), Expect = 6e-30 Identities = 302/443 (68%), Gaps = 5/443 (1%) Strand=Plus/Plus Query 364717 AAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCA 364776 ||| | |||||| |||||||| | | ||||||||||| || ||||| || ||| Sbjct 77551 AAGCAACATGGTGTCCGCAACTCTTTGCTGCTTGCGCCCATGCCAACTGCTTCAACAGCA 77610 Query 364777 CAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGG 364836 || || | || ||||| |||| || ||||||| || |||| ||||| |||| || Sbjct 77611 CAAATTATGGGCAACAATGAGTCATTTGAACCGTACACTTCCAATATTTATACACGTCGT 77670 Query 364837 GTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAG-GATCTTTCCGACCG 364895 || ||||| || ||||||| || || ||| | || | || | | ||||| |||| Sbjct 77671 GTGCTTTCGGGTGAATTTCAAGTTGTAAATCATCACTT-GTTACGCGATCTAACCGAGTT 77729 Query 364896 CGG-GCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGA 364954 || ||||||| ||| |||||||| |||| || || | || || | || | Sbjct 77730 GGGTNCTGTGGGATGATGATATGAAGAATAATATTATAACCAGTCGCGGATCCATACAAA 77789 Query 364955 ACATTCCAGGATTTCCAGAAGATCTGAAGCC-TATTTACAAAACCGTATGGGAAATTTCC 365013 | ||| | | ||| | | | | || | | |||||||| || ||||| |||||| Sbjct 77790 ATATTGAATCCATACCACAGCACAT-ACGCGATCTATACAAAACTGTTTGGGAGATTTCC 77848 Query 365014 ATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCG 365073 || ||| || | ||||| || ||||| ||||| || ||| |||||| |||||| Sbjct 77849 GTGAAAACATCGATCAAAATGGCTGCAGATCGTGGTGCATTCATCGATCAGAGTCAGTCG 77908 Query 365074 TTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGG 365133 || ||| || | || || |||| | || | ||||| || || || ||||||||||| Sbjct 77909 TTCAACATACACGTGGCTGAGCCCAACTATGGTAAGCTCACTTCTATACATTTCTACGGC 77968 Query 365134 TGGAAATCCGGTCTTAAGACAGG 365156 ||||| | ||||| ||||| || Sbjct 77969 TGGAAGGCAGGTCTCAAGACTGG 77991 Score = 104 bits (114), Expect = 6e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 364990 TACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGT 365049 |||||||| || ||||| |||||| || ||| || | ||||| || ||||| ||| Sbjct 84901 TACAAAACAGTTTGGGAGATTTCCGTGAAAACATCGATCAAAATGGCTGCAGATCGTGGT 84960 Query 365050 GCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAG 365109 || || ||| |||||| |||||||| ||| || | || || |||| | || | ||| Sbjct 84961 GCATTCATCGATCAGAGTCAGTCGTTCAACATACACGTGGCTGAGCCCAACTATGGTAAG 85020 Query 365110 CTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 || || || || ||||||||||| ||||| | ||||| ||||| || Sbjct 85021 CTCACTTCTATACATTTCTACGGCTGGAAGGCAGGTCTCAAGACTGG 85067 >seq157 Length=290505 Score = 167 bits (184), Expect = 6e-36 Identities = 421/635 (66%), Gaps = 4/635 (1%) Strand=Plus/Plus Query 111290 AATGCGTTTTAATCTGTCAACTCATTTTCCACTTCTCACAACAAAGCGAACATATTGGAA 111349 |||||| || ||||| || | ||||||| | || || || |||||| || |||| Sbjct 144444 AATGCGCTTCGATCTGCGAAATAGTTTTCCATTACTAACTACGAAGCGAGTATTTTGGCG 144503 Query 111350 GGGAATTGTCGAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGC 111409 | | | |||||| | ||||||||| ||| || | ||| | || || |||| Sbjct 144504 TGCTGTCGCTGAAGAATTGCTGTGGTTTGTTCATGGTAAAACAGACGCTAAAATACTTCA 144563 Query 111410 AGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGG 111469 || ||||||| | | || ||||||||||| | || || || |||| | ||| Sbjct 144564 AGAAAAAAATATTCACATATGGGATGGAAACAGTAATCGGGAGTTCTTAGACAAATGTGG 144623 Query 111470 TCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTT 111529 || ||| | || ||||||||||| || |||||||| || ||||| ||||| || || Sbjct 144624 GTTTTCCGATAGGGAGGAAGGTGATCTAGGCCCAGTTTATGGTTTTCAGTGGCGTCATTT 144683 Query 111530 TGGTGCAGACTACAAAACCATGCACG-ACTCATATGATTCACAGGGAACTGATCAATTAC 111588 ||| || | |||| || | |||| | || || | |||| | |||||| | | Sbjct 144684 TGGGGCCAAGTACAGAAAC-TGCAAGGACAGTTACAAAGATGAGGGTATAGATCAACTTC 144742 Query 111589 AGAATGTCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCAT 111648 || | || ||||| ||| | ||||| |||| | ||| || ||||| ||| ||| | Sbjct 144743 AGCAAGTAATTGACACAATCAGAAACAATCCAAATGATCGGCGTATTATAATGTCTGCTT 144802 Query 111649 GGAACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGC-CAGTTT 111707 |||| || | | ||||||| || ||||| |||||| | | ||| || ||| Sbjct 144803 GGAATCCTGTCGATATCCCTCAAATGGCTCTACCACCTTGTCATTGTCT-TGCACAATTT 144861 Query 111708 TATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTT 111767 | ||| | | || | || || ||| | || || || ||| ||||| || | Sbjct 144862 TTTGTTGCCAATGGAGAATTATCTTGTCAATTATACCAACGCAGTGCCGATATGGGATTG 144921 Query 111768 GGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACA 111827 ||||| || ||||||||||| ||||| | ||||| | | || |||||| |||| Sbjct 144922 GGTGTACCATTTAATATTGCCTCGTACGCTTTGCTTACCTATATGATTGCTCATATTACT 144981 Query 111828 AATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGCGCATGTTTACACAAACCAC 111887 ||||| ||| || || || | ||| | | || ||||| ||||| || | || || Sbjct 144982 GATCTCCGACCAGGGGATTTTGTCCACACTTTGGGCGATGCACATGTCTATAATAATCAT 145041 Query 111888 ATTGATGCACTTAAAACACAGTTGAAGCGCAAACC 111922 ||||| ||| | ||| |||||| | ||| ||||| Sbjct 145042 ATTGAAGCATTAAAAGAACAGTTAACGCGAAAACC 145076 >seq225 Length=233467 Score = 102 bits (112), Expect = 2e-16 Identities = 155/214 (72%), Gaps = 9/214 (4%) Strand=Plus/Plus Query 22440 TAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAA--CGTTCA--TTCGCGGAACGTC 22495 |||||||||||||||||| ||||| | ||| || || || | |||||| Sbjct 26507 TAAGGCAGATTGGGCGCTTGCTTGGATTTCCTC-GAAGTCGGCCAACTTTGGTGAACGTG 26565 Query 22496 TTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGG-AGCATTTTG-TGCAATCTT 22553 | ||||||||||||| |||||||| |||||||| ||| || ||||| | | ||||| Sbjct 26566 TAATTGCATTTGCTGCCGTTGAAGGTATTTTCTTCAGTGGCAG--TTTTGCTTCGATCTT 26623 Query 22554 TTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCG 22613 ||||| || ||||||| | ||||| || | || ||||| ||||| ||||| || Sbjct 26624 CTGGCTTAAGAAACGTGGTTTAATGCCAGGCTTGACATTTTCCAATGAACTAATTTCACG 26683 Query 22614 AGATGAGGGTCTTCATACCGATTTTGCGTGTATG 22647 ||||||||| |||||| || || || ||| || Sbjct 26684 AGATGAGGGACTTCATTGTGACTTCGCATGTTTG 26717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302819892992720