Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq291 167 2e-36 seq749 127 2e-24 seq609 125 7e-24 seq2732 87.8 2e-12 >seq291 Length=196152 Score = 167 bits (184), Expect = 2e-36 Identities = 717/1118 (64%), Gaps = 28/1118 (3%) Strand=Plus/Minus Query 145049 AAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGAC 145108 |||| ||||| || || ||||| || || | | ||||||||| ||| | || || Sbjct 77708 AAGTGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGTATAAATATTGGAA 77649 Query 145109 GTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATG 145168 ||| | |||||||| ||||| || ||||||| ||||| || || | || || |||||| Sbjct 77648 GTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATG 77589 Query 145169 TACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCC 145228 ||| | || || || ||||| | || || | ||| || | ||||| | | Sbjct 77588 GGCGCAAGCAGCAAAGAGTTGCGGACACCATGTTGCTTTATTTTCTCCTTCAATTCGGTC 77529 Query 145229 CAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTG 145288 |||| ||| || ||| || | ||||||||||| ||||| | ||| |||| || Sbjct 77528 CAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTGTAGAATACCCTTACTA 77469 Query 145289 GCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCC 145348 |||| |||| | | | || |||| | ||| || | |||||||| || Sbjct 77468 ACGGGTGAACCTTTATACGTTTCATAGGTGCCATAGTTTTCAGCTAATTCGCAACTGGCT 77409 Query 145349 TCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCG 145408 |||| ||||| | ||||| || ||| |||||| || | | | ||||| || Sbjct 77408 TCCAAGGCGCCATAGTAAATAGTTTCGAATATTTGCTGATTCAAACGGAATGCTTCTTCA 77349 Query 145409 CTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCG 145468 || ||||| || |||| || | ||||| ||||| | || ||||| || | || Sbjct 77348 CTTTCGTATGGGTAACGCATTAGAATTAAAGCGTCGGCAAAACCTTGTATGCCAATACCA 77289 Query 145469 ATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCG 145528 ||||| |||||| | | || |||| ||| | | ||||| ||||| ||| Sbjct 77288 ATGGGACGATGTCTGAAATTCGATTTCCTTGCCTCCGGCAAGGGATAATGATTAATGTCT 77229 Query 145529 ATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAA----TGTGCCGCAACTTTTCAAA 145584 || |||||||||| || || || |||||| | | || || ||| ||| Sbjct 77228 ATGATTTTATTCAGATTACGTGTAACGGTCTTTGTGACTTCTTTGAGGC-GCTT---AAA 77173 Query 145585 GTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACA 145644 |||| || |||| || || ||| |||| | ||||||||| ||||| || || Sbjct 77172 GTCATACGTTTTCTCGGGTGTGA-CAAACA--TATTCAAGGCGATCGAAGCCAAGTTGCA 77116 Query 145645 AACTGCCGTCTCCTC-GGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATT 145703 || || ||| || || | || |||| || || |||| || ||||| ||||| | Sbjct 77115 CACAGCTACCTCATCGGGTGACG-AATATTCCACAATTTCGGTACATAAATTACTACACT 77057 Query 145704 TGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGT 145763 | || || || | ||| || |||||||| || | || || || || || || | ||||| Sbjct 77056 TAATTGTGCCAACATTCTGTTGATTACTCTTTCGATTACAAGCATCTTTATACAACATGT 76997 Query 145764 ACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTGCAAGTC-CTGCGCAC 145820 | ||| ||| |||||||| |||| || | || |||| ||| | || || Sbjct 76996 ATGGTGTGCCGGTCTCCACTTGCGATTCAATAATGCTAAAC---CAAAGACTTTGTGCTT 76940 Query 145821 GCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGG 145880 | | || | | || || || | ||| |||||| || | || || ||| | Sbjct 76939 TTATTTTCTTATTGGCACGTCCTTCCTGTTCATATTTCAGATATAACTTTTCGAACTCTT 76880 Query 145881 AACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGT 145940 ||| | || | ||||||||||||| |||||||| |||||||| | | | Sbjct 76879 CACCCCATACTTCATGTAAACCGGGACACTTGTGTGGACACATTAGCGACCAGTCTTCAT 76820 Query 145941 TGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC--G 145998 ||| | || || | |||||| | ||| || | ||| | || || | ||| || | | Sbjct 76819 CGGCTTCTACACGTTTCATAAATAGATCAGGTATCCATAAGGCATAGAACAAATCTCTGG 76760 Query 145999 CGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAAT-TAAGCACACTATAGATGTCCG 146057 ||| ||| || || || ||||| ||||| | || | | | | || || | Sbjct 76759 CGCGATGC--TCTTCTTTGCCAGTGTTTTTTTTCAATTCCAAAAATTCGA-AAATATCAG 76703 Query 146058 CGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---GCCACCCTGGTCCA 146114 | ||||| ||||| | |||| ||| | ||| ||| |||||| |||||| || |||| Sbjct 76702 CATGCCATGGTTCCAGGTAGATGGCAAAGGCGCCTGGTCGTTTACCGCCACCTTGATCCA 76643 Query 146115 CGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGC 146152 | | ||| | || || || || || |||| ||| ||| Sbjct 76642 CATAGCGTGCTATATTATTGAACACTCGCAACATAGGC 76605 >seq749 Length=113903 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || || || || |||||||||| || || ||||||||||| || || ||| | Sbjct 712 CCACCACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTTTGAATATTATAGTCGGAC 771 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| | ||| ||||| ||| | || ||||| || || || || ||| Sbjct 772 AGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGG 831 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| || || ||| ||| || |||| | ||| | ||||||| | ||| | Sbjct 832 ATTCCTTCCTTATC-TTGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAAC 890 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | |||||| || || | |||||| ||||||||||||||| Sbjct 891 CTCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCATG 939 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||||| || || || | || || |||||||| |||||||||||| | Sbjct 484 CCACCGCGGAGACGCAATACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCGGAC 543 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||| || | ||||| || ||| |||||||||| || || || ||||| Sbjct 544 AAGGTACGTCCGTCTTCCAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGA 603 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| ||| ||||| | | | || | ||||||| | || | Sbjct 604 ATACCCTCCTTGTC-CTGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAAGGTTCAAC 662 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| |||||||| || | |||||| ||||| || ||||| Sbjct 663 CTCCAGAGTAATTGTTTTACCCGTCAAAGTTTTAACGAAGATTTGCAT 710 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || || || | || ||||| ||||| |||||||||||| | Sbjct 28 CCACCACGGAGACGCAATACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGAC 87 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| | || ||||| ||| |||| ||||| ||||| || || || Sbjct 88 AAGGTACGTCCGTCCTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGA 147 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || ||| | | ||| | ||||| | | || | Sbjct 148 ATGCCTTCCTTATCTTGGATCTTAGCCTTAACGTTCTCAATGGTATCTGAAGGTTCAACN 207 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| |||||| || || || || || ||||| || ||||| Sbjct 208 TCCAAGGTAATGGTTTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 254 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || ||||| | || |||||||| || |||||||||||| Sbjct 939 GCCACCACGTAGACGAAGAACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGA 998 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| ||| || || || || || || |||||||||| || || || || || Sbjct 999 CAGAGTGCGTCCGTCTTCCAGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGG 1058 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185 ||||||||||||||| ||| | | |||| | | | || | |||||||| | || | Sbjct 1059 GATTCCTTCTTTGTC-TTGAATCTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAA 1117 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || | || || ||||| || ||||| Sbjct 1118 CCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCAT 1166 >seq609 Length=128410 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||||| || ||||| | ||| ||||||||||| |||||||| ||| | Sbjct 92970 CCACCACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGAC 92911 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || || || | || || || ||| |||| |||||||| || || || ||| Sbjct 92910 AAGGTACGACCATCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGG 92851 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| |||||| |||| | || | || || | | ||||| Sbjct 92850 ATACCCTCTTTGTCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACC 92791 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| ||||| |||| ||||| |||||||||||||| Sbjct 92790 TCTAAGGTGATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 92744 >seq2732 Length=47336 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 131004 TGAGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC 131063 || |||||| | | ||| || |||||||| | || ||||| || ||||| || || || Sbjct 1602 TGCGCCACCTCTAAGACGAAGTACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTC 1661 Query 131064 GCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGG 131123 || ||||| || || | ||||| || || | |||| |||||| || || || Sbjct 1662 AGCCAATGTGCGACCATCTTCCAATTGCTTTCCGGCAAAAATTAGACGCTGTTGATCAGG 1721 Query 131124 AGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTC 131183 || |||||||| || || ||||| ||| | || || | |||||| | | ||| Sbjct 1722 CGGAATTCCTTCCTTATCTTGAATTTTGGCCTTAACATGTTCAATAGTATCCGAAGGCTC 1781 Query 131184 GATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | || | || | ||| ||||| || || ||||||||||| || ||||| Sbjct 1782 AACCTCAAGAGTGATGGTCTTACCCGTAAGGGTTTTTACGAATATTTGCAT 1832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471824230886400