Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq609 104 2e-17
seq749 84.2 2e-11
>seq609
Length=128410
Score = 104 bits (114), Expect = 2e-17
Identities = 164/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || || | ||| |||| ||| || || ||||||||||| ||||||||||||| |
Sbjct 92970 CCACCACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGAC 92911
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | || ||||||||||| || || | || | |||||||| || ||
Sbjct 92910 AAGGTACGACCATCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGG 92851
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||||||||| || || ||| || || | | | ||||| |||||
Sbjct 92850 ATACCCTCTTTGTCTTGGATTTTAGCT--TTGACATTTTCGATGGTGTCAGAAGGCTCGA 92793
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|| | ||||||||| || || || | |||||||| |||||||||||||||
Sbjct 92792 CCTCTAAGGTGATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCATTTTG 92740
>seq749
Length=113903
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/214 (69%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| || | ||| || ||||| |||||||| || || ||||||| || || | |||
Sbjct 727 AGAACTAAATGTAGAGTGGATTCCTTTTGAATATTATAGTCGGACAGTGTGCGTCCATCC 786
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
||||| |||||||| || |||| | || ||||| || || | || || || ||
Sbjct 787 TCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCT 846
Query 16844 GCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
||||| ||| || || | | | || ||| ||||| |||| |||||||
Sbjct 847 TGAATTTTAGCT--TTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGG 904
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||||| |||| |||||||| |||||||||||
Sbjct 905 TTTTTCCCGTCAAAGTTTTGACGAAAATCTGCAT 938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404930213160400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |